Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18m05
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331... 59 3e-09
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 40 0.001
09_06_0121 + 20975132-20975755,20976834-20976977,20977333-209774... 35 0.048
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 33 0.25
07_01_0972 - 8176013-8176960 32 0.45
03_05_0802 - 27823213-27823701,27823911-27823959,27824053-278241... 32 0.45
02_01_0109 - 795066-796280 31 1.0
10_08_0299 - 16607152-16607322,16607465-16607785,16607870-166081... 30 1.4
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 30 1.4
08_01_0410 + 3661304-3661383,3661494-3661673,3661757-3661870,366... 29 2.4
01_06_1142 + 34856497-34856698,34857852-34858402 29 2.4
05_07_0062 + 27423081-27423287,27423372-27423449,27423548-274235... 29 3.1
02_04_0561 + 23879976-23879981,23880531-23882558,23882687-238827... 29 3.1
07_03_0383 - 17476271-17479228,17480466-17480750 28 5.5
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 28 5.5
05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351 28 7.2
12_02_1038 - 25596027-25596393,25596492-25596660,25597283-255973... 27 9.6
03_02_0885 - 12169913-12170497,12170593-12170943 27 9.6
02_05_0322 - 27926619-27927686 27 9.6
>01_06_0898 -
32832665-32832724,32832761-32832815,32832957-32833135,
32833218-32833328,32833600-32833647,32833810-32833949,
32834402-32834539,32834660-32834804,32834936-32835002,
32835226-32835329,32835444-32835647
Length = 416
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 352 NISVEESPTKRKNDMTISEN-YAFTGVHHIFDQHTEQVSVVKFANNDRSKLCCASDDGTV 528
N+S+ + + + +E Y+F G+H IFD V+++KF L + DG++
Sbjct: 137 NLSISSKQSDPERHVRFAEPAYSFVGMHCIFDDCKASVTILKFGRASSDLLTYGASDGSL 196
Query: 529 SICDVTATPPRVSVILDGHTKAVTGCDWSASNELLVT 639
++C V + PP V L GH+K +T D+S++N+ + +
Sbjct: 197 TVCQV-SDPPTVLQKLIGHSKDITDFDFSSNNQYIAS 232
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 385 KNDMTISENYAFTGVHHIFDQHTEQVSVVKFANNDRSKLCCASDDGTVSICDVTATPPRV 564
K D+ + + + D + + + V+ ++ N R L A DDG+V + D TA P+V
Sbjct: 154 KGDLILHNLASGARAAELSDPNGQVLRVLDYSRNSRHILVTAGDDGSVHLWDTTARTPKV 213
Query: 565 SVILDGHTKAVTG-CDWSASNELLVT 639
S L H+ ++G C +S++++ T
Sbjct: 214 S-WLKQHSAPISGVCISPSSDKIIAT 238
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +1
Query: 442 DQHTEQVSVVKFANNDRSKLCCASDDGTVSICDVTATPPRVSVILDGHTKAVTGCDWSAS 621
D E + + F+N LC V I D+ R L GHT +TG ++
Sbjct: 87 DDIEECIYSISFSNKGSRYLCSGGSGHIVRIWDLQRK--RCIKWLSGHTDTITGVMYNCK 144
Query: 622 NELLVT 639
+E L +
Sbjct: 145 DEHLAS 150
>09_06_0121 +
20975132-20975755,20976834-20976977,20977333-20977457,
20978090-20978194,20978755-20978989
Length = 410
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/82 (23%), Positives = 35/82 (42%)
Frame = +1
Query: 391 DMTISENYAFTGVHHIFDQHTEQVSVVKFANNDRSKLCCASDDGTVSICDVTATPPRVSV 570
D+ + HH+F+ H + V V + D + A DD + + D+ P S+
Sbjct: 191 DLAAGSGASSLDAHHVFEAHDDVVEDVAWHLKDENLFGSAGDDCKLMMWDLRTNKPGQSI 250
Query: 571 ILDGHTKAVTGCDWSASNELLV 636
+ H K V ++ NE ++
Sbjct: 251 V--AHQKEVNSLSFNPFNEWIL 270
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 487 DRSKLCCASDDGTVSICDVTATPPRVSVILDGHTKAVTGCDWSASNELLVT 639
D L AS D T +I + + L+GH V WSAS LL T
Sbjct: 83 DGKLLATASFDSTTAIWEYSGGDFECVATLEGHENEVKSVSWSASGSLLAT 133
>07_01_0972 - 8176013-8176960
Length = 315
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 433 HIFDQHTEQVSVVKFANNDRSK-LCCASDDGTVSICDVTATPPRVSVILD-GHTKAVTGC 606
H+F H V+ + +A + L C S DGT+S+ + A + ++ H VT
Sbjct: 98 HVFTDHKSSVNSIAWAPYEVGLCLACGSSDGTISVMTMRADGGWDTARIERAHPVGVTAI 157
Query: 607 DWSASNEL 630
W+ + L
Sbjct: 158 SWAPATAL 165
>03_05_0802 -
27823213-27823701,27823911-27823959,27824053-27824120,
27824208-27824276,27824391-27824460,27824556-27824635,
27824706-27824784,27824949-27825025,27825110-27825176,
27825285-27825381,27825478-27825574,27825701-27825739,
27825843-27825907,27826034-27826142,27826275-27826487
Length = 555
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 487 DRSKLCCASDDGTVSICDVTATPPRVSVILDGHTKAVTGCDWSAS 621
D + + S DG V + V P R +IL+GH T DW AS
Sbjct: 337 DGTHILGGSSDGNVYLWQVDQ-PERGPIILEGHEGEATSVDWCAS 380
>02_01_0109 - 795066-796280
Length = 404
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 460 VSVVKFANNDRSKLCCASDDGTVSICDVTATPPRVSVILDGHTKAVTGCDWSASNELLVT 639
V V+F +L S D ++ DV A +DGH +AVT W+A+ +VT
Sbjct: 212 VLCVEFDPAGGPQLAVGSADRRAAVHDVRALGRGAVASMDGHGRAVTYVRWAATARRVVT 271
>10_08_0299 -
16607152-16607322,16607465-16607785,16607870-16608121,
16608298-16608435,16608544-16608651,16608814-16609014,
16609109-16609233,16609252-16609321,16609919-16610455
Length = 640
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 433 HIFDQHTEQVSVVKFANNDRSKLCCASDDGTVSICDV--TATPPRVSVILDGHTKAVTGC 606
H+ HTE ++ VKF + D L S D T+ I D+ TP +V L H A T
Sbjct: 362 HVEKTHTEDITGVKF-STDGQILLSRSMDSTLKIWDLRKMKTPLKVFEDLPNH-YAETNV 419
Query: 607 DWSASNELLVT 639
+S +L+ T
Sbjct: 420 AFSPDEQLIFT 430
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 433 HIFDQHTEQVSVVKFANNDRSKLCCASDDGTVSICDVTATPP 558
H+F H + VS VKF + ++L AS D T+ + DV P
Sbjct: 553 HVFGGHKKAVSYVKFLST--NELASASTDSTLRLWDVKENCP 592
>08_01_0410 + 3661304-3661383,3661494-3661673,3661757-3661870,
3661975-3662133,3662193-3662243,3662838-3663018,
3663102-3663228,3663322-3663431,3663529-3663667,
3663767-3663876,3664002-3664071,3664247-3664320,
3664458-3664553,3664682-3664777,3665041-3665168,
3665422-3665656,3665743-3665910,3666274-3666381,
3666468-3666617,3666905-3667015,3667118-3667297,
3667427-3667555,3667819-3667914,3668108-3668293,
3668431-3668603,3668720-3668921
Length = 1150
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 475 FANNDRSKLCCASDDGTVSICDVTATPPRVSVILDGHTKAVTGCDWSASNELLVT 639
F D + + +D T+ I +V V L GH+K +TG +S S +LV+
Sbjct: 906 FHPQDNNIIAIGMEDSTIQIYNVRVD--EVKSKLKGHSKKITGLAFSQSMNMLVS 958
>01_06_1142 + 34856497-34856698,34857852-34858402
Length = 250
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Frame = +1
Query: 364 EESPT--KRKNDMTISENYAF--------TGVHHIFDQHTEQVSVVKFANNDRSKLCCAS 513
EESPT K K+D + +N A + +HH FD EQ+ + +A+ND S S
Sbjct: 168 EESPTDKKPKSDRPLHQNIAMRDHNSERISEMHH-FDTEHEQIRRMMYASNDSSSRSSGS 226
Query: 514 DDGTVSICDVTATPPRVS 567
G +S D + P S
Sbjct: 227 -LGQMSFYDNVMSNPSTS 243
>05_07_0062 +
27423081-27423287,27423372-27423449,27423548-27423597,
27423714-27423767,27423965-27424017,27424101-27424173,
27424718-27424767,27424919-27424987,27425183-27425291,
27425658-27425725,27425982-27426082,27426260-27426412,
27426503-27426570,27426898-27426943,27427027-27427107
Length = 419
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 566 LTRGGVAVTSHMDTVPSSEAQHSFERSLFANF 471
L+RG + T H PSSE + +RS FA F
Sbjct: 342 LSRGRLCATPHCVKAPSSENASNVDRSTFAMF 373
>02_04_0561 +
23879976-23879981,23880531-23882558,23882687-23882722,
23882826-23882939,23883158-23883226,23883311-23883445
Length = 795
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 199 DFVCVCTGF*S*DCLVLCKH*IGHLKRRSAAEMQPPYLIE 80
D C+C GF +LC+H + LK + E+ P Y+++
Sbjct: 531 DLTCICGGFQFNG--ILCRHSLSVLKFQQVREIPPHYVLD 568
>07_03_0383 - 17476271-17479228,17480466-17480750
Length = 1080
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 149 EHQTILTLKSCTYADEVNFLEKMPSLRILTQLRNT*MCGVSYCSVVTESKTTSQSVLHLL 328
EH T L +AD + +E +PSLR L RN + + + + K VL ++
Sbjct: 860 EHCTALRSLRIDHADSLKTIENLPSLRELEVHRNKKLKRILNLESLEDLKVVHCLVLKVV 919
Query: 329 DKDPAVKSTY 358
P++++ +
Sbjct: 920 HGVPSLRAVH 929
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -3
Query: 630 QLVRRRPVAPSDGFG-VSIEND--ADARRRRCDVTYGHGPIV 514
++VR + S GFG +S+E D ADA R CD T +G I+
Sbjct: 545 RVVRDKRSGDSRGFGFLSLEKDEDADAAIRACDETEWNGRII 586
>05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351
Length = 1007
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 216 IFSKKLTSSAYVQDFKVRIVWCSVSIKSGI*SEDLLLKCSR 94
+ KL + KVRI +C + +K+G+ + DL+ + R
Sbjct: 89 VLRSKLAGPSNYHHLKVRICFCCIWLKNGLFNRDLVKQIMR 129
>12_02_1038 -
25596027-25596393,25596492-25596660,25597283-25597349,
25597617-25597794,25599157-25599228,25599311-25599717,
25600035-25600740,25600829-25600998,25601963-25602022,
25602385-25602435
Length = 748
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 381 KEE*HDNIRELCLYRSTSHI*PAHRTSECREVREQRPLEAV 503
KEE DN ++L +Y+ + ++ PA V + RPL A+
Sbjct: 592 KEETTDNDKQLVIYQDSINLTPAESVLATPSVVDYRPLVAL 632
>03_02_0885 - 12169913-12170497,12170593-12170943
Length = 311
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 513 RRWDRVHM*RHSDAAARQRHSRWTHQSRHWVRLVG 617
RRW+R R +A R + WTH W R G
Sbjct: 267 RRWERER--RAREAERRAASTSWTHARTGWGRAAG 299
>02_05_0322 - 27926619-27927686
Length = 355
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 445 QHTEQVSVVKFANNDRSKLCCASDDGTVSICDVTATPPRV 564
+H + V +A LC A DDG I ++ ATP V
Sbjct: 273 RHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPGAV 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,744,663
Number of Sequences: 37544
Number of extensions: 298548
Number of successful extensions: 839
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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