Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18k21
         (438 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   7.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   7.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.9  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.9  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 78  LKYRARRYIFRSVILLYLRSH 140
           LK R  RY+F  + LLY   H
Sbjct: 39  LKNRTGRYMFTYLHLLYQDVH 59


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 268 KYHMNYKITRNYHLL 312
           ++  +YK+TRN  LL
Sbjct: 348 QFEADYKLTRNLELL 362


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 209 IYPGSPTAALQELAGGI 159
           + PG PT    EL  GI
Sbjct: 135 VLPGKPTTTSDELKRGI 151


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 127 YNNITDRKIYLLALYLRSDFLFYK 56
           +NN  D K YL+  +   +  FY+
Sbjct: 296 FNNDDDIKSYLIQFFANKNQKFYE 319


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 227 FTPFEVIYPGSPTAALQELAGGIKTWRL 144
           +T  EVI    PT A    + GI  W++
Sbjct: 220 YTAPEVIKQNRPTPAADIYSLGIVAWQM 247


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 268 KYHMNYKITRNYHLL 312
           ++  +YK+TRN  LL
Sbjct: 348 QFEADYKLTRNLELL 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,675
Number of Sequences: 438
Number of extensions: 2710
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)