Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18k18
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB045125-1|BAD83600.1| 361|Homo sapiens KPG_013 protein protein. 33 1.0
U10554-1|AAB92675.1| 532|Homo sapiens vesicular acetylcholine t... 31 4.1
U09210-1|AAA20497.1| 532|Homo sapiens vesicular acetylcholine t... 31 4.1
DQ993202-1|ABJ97707.1| 886|Homo sapiens extended-synaptotagmin ... 31 4.1
BC037292-1|AAH37292.1| 501|Homo sapiens FAM62C protein protein. 31 4.1
BC007765-1|AAH07765.1| 532|Homo sapiens solute carrier family 1... 31 4.1
BC101175-1|AAI01176.1| 361|Homo sapiens GPR120 protein protein. 29 9.5
AY288417-1|AAP72126.1| 376|Homo sapiens G protein-coupled recep... 29 9.5
AY255573-1|AAO85085.1| 248|Homo sapiens G protein-coupled recep... 29 9.5
AL356214-4|CAH72327.1| 361|Homo sapiens G protein-coupled recep... 29 9.5
AL356214-3|CAH72326.1| 377|Homo sapiens G protein-coupled recep... 29 9.5
AB115768-1|BAD83368.1| 377|Homo sapiens G-protein-coupled recep... 29 9.5
>AB045125-1|BAD83600.1| 361|Homo sapiens KPG_013 protein protein.
Length = 361
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +1
Query: 367 GNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYKRNIAKV 546
G + ++ F + A+ LV ++W+ AWL+GPV+ ++ I +
Sbjct: 72 GATASLVLNLFCADLLFTSAIPLVLVVRWTEAWLLGPVVCHLLFYVMTMSGSV--TILTL 129
Query: 547 AALSSEKDVILARL 588
AA+S E+ V + RL
Sbjct: 130 AAVSLERMVCIVRL 143
>U10554-1|AAB92675.1| 532|Homo sapiens vesicular acetylcholine
transporter protein.
Length = 532
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 400 LKKVSIVGAVYLVGYMQWSVAWLIGPVI 483
++ VS+ G+VY + + +SVA+ +GP++
Sbjct: 411 VRHVSVYGSVYAIADISYSVAYALGPIV 438
>U09210-1|AAA20497.1| 532|Homo sapiens vesicular acetylcholine
transporter protein.
Length = 532
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 400 LKKVSIVGAVYLVGYMQWSVAWLIGPVI 483
++ VS+ G+VY + + +SVA+ +GP++
Sbjct: 411 VRHVSVYGSVYAIADISYSVAYALGPIV 438
>DQ993202-1|ABJ97707.1| 886|Homo sapiens extended-synaptotagmin 3
protein.
Length = 886
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 TFLKKVSI-VGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYK--RNIAKVAALSSE 564
TF+ +V +G VYL GY+ S+ WL+ +L + WR+ K R A L +E
Sbjct: 37 TFVVRVLFYLGPVYLAGYLGLSITWLLLGALLWMW---WRRNRRGKLGRLAAAFEFLDNE 93
Query: 565 KDVILARL 588
++ I L
Sbjct: 94 REFISREL 101
>BC037292-1|AAH37292.1| 501|Homo sapiens FAM62C protein protein.
Length = 501
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 TFLKKVSI-VGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYK--RNIAKVAALSSE 564
TF+ +V +G VYL GY+ S+ WL+ +L + WR+ K R A L +E
Sbjct: 37 TFVVRVLFYLGPVYLAGYLGLSITWLLLGALLWMW---WRRNRRGKLGRLAAAFEFLDNE 93
Query: 565 KDVILARL 588
++ I L
Sbjct: 94 REFISREL 101
>BC007765-1|AAH07765.1| 532|Homo sapiens solute carrier family 18
(vesicular acetylcholine), member 3 protein.
Length = 532
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 400 LKKVSIVGAVYLVGYMQWSVAWLIGPVI 483
++ VS+ G+VY + + +SVA+ +GP++
Sbjct: 411 VRHVSVYGSVYAIADISYSVAYALGPIV 438
>BC101175-1|AAI01176.1| 361|Homo sapiens GPR120 protein protein.
Length = 361
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 367 GNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYKRNIAKV 546
G + ++ F + + A+ LV ++W+ AWL+GPV ++ I +
Sbjct: 72 GATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSV--TILTL 129
Query: 547 AALSSEKDVILARL 588
AA+S E+ V + L
Sbjct: 130 AAVSLERMVCIVHL 143
>AY288417-1|AAP72126.1| 376|Homo sapiens G protein-coupled receptor
120 protein.
Length = 376
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 367 GNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYKRNIAKV 546
G + ++ F + + A+ LV ++W+ AWL+GPV ++ I +
Sbjct: 71 GATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSV--TILTL 128
Query: 547 AALSSEKDVILARL 588
AA+S E+ V + L
Sbjct: 129 AAVSLERMVCIVHL 142
>AY255573-1|AAO85085.1| 248|Homo sapiens G protein-coupled receptor
PGR4 protein.
Length = 248
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 367 GNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYKRNIAKV 546
G + ++ F + + A+ LV ++W+ AWL+GPV ++ I +
Sbjct: 24 GATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSV--TILTL 81
Query: 547 AALSSEKDVILARL 588
AA+S E+ V + L
Sbjct: 82 AAVSLERMVCIVHL 95
>AL356214-4|CAH72327.1| 361|Homo sapiens G protein-coupled receptor
120 protein.
Length = 361
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 367 GNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYKRNIAKV 546
G + ++ F + + A+ LV ++W+ AWL+GPV ++ I +
Sbjct: 72 GATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSV--TILTL 129
Query: 547 AALSSEKDVILARL 588
AA+S E+ V + L
Sbjct: 130 AAVSLERMVCIVHL 143
>AL356214-3|CAH72326.1| 377|Homo sapiens G protein-coupled receptor
120 protein.
Length = 377
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 367 GNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYKRNIAKV 546
G + ++ F + + A+ LV ++W+ AWL+GPV ++ I +
Sbjct: 72 GATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSV--TILTL 129
Query: 547 AALSSEKDVILARL 588
AA+S E+ V + L
Sbjct: 130 AAVSLERMVCIVHL 143
>AB115768-1|BAD83368.1| 377|Homo sapiens G-protein-coupled receptor
GT01 protein.
Length = 377
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 367 GNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQWRKENEYKRNIAKV 546
G + ++ F + + A+ LV ++W+ AWL+GPV ++ I +
Sbjct: 72 GATACLVLNLFCADLLFISAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSV--TILTL 129
Query: 547 AALSSEKDVILARL 588
AA+S E+ V + L
Sbjct: 130 AAVSLERMVCIVHL 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,948,961
Number of Sequences: 237096
Number of extensions: 1507439
Number of successful extensions: 2851
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2851
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -