Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18j02
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061555-1|AAL29103.1|  487|Drosophila melanogaster LP09309p pro...   111   1e-24
AE014134-412|AAF51252.1|  487|Drosophila melanogaster CG9886-PA ...   111   1e-24
AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA...    31   1.9  

>AY061555-1|AAL29103.1|  487|Drosophila melanogaster LP09309p
           protein.
          Length = 487

 Score =  111 bits (266), Expect = 1e-24
 Identities = 55/113 (48%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
 Frame = +2

Query: 329 GGSALLPLPKSPITLEEKIGLVKKLANSGADIKELNTVRKVISDLKGGQLA-VKAQPAQV 505
           GGSALLPLP+SP+TLE+K  +  KL   GA I+E+N VR   SD+KGG+LA +  Q   +
Sbjct: 151 GGSALLPLPRSPLTLEDKRSIADKLMKRGASIQEINAVRIACSDIKGGRLARLAGQAGLL 210

Query: 506 VSLILSDIVGDPLDLIASGPTVQNTDGANKAVDVLKKYNLIDALPKSVQTLLE 664
           V+ +LSDI+GDPL+LIA GPT+Q  + A    D+LKK+++ + L   ++ + E
Sbjct: 211 VTFVLSDIIGDPLELIACGPTIQ-PEAAASPSDILKKHHVWEELSPEIRRVFE 262



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
 Frame = +3

Query: 66  QIFKSSVSAVLPENL--------IRSSLKYNPTNEHLNILGKTYNLLGKNVYLVGTGKAV 221
           QIF  +V+AV PE +        +R  +  N T+  + + G+  ++ GK  ++VG GKAV
Sbjct: 12  QIFVQAVNAVHPEKVFADFQKFDLRPQIGENATDISIKLNGERQDISGKTCHIVGFGKAV 71

Query: 222 QNMSREVENILQSKIKYGIISIPMGSLDVFNK 317
             M+ +V+  L +    G++S+P+ +L  F +
Sbjct: 72  LGMANKVQQDLGATSAGGVLSVPVNTLKQFQQ 103


>AE014134-412|AAF51252.1|  487|Drosophila melanogaster CG9886-PA
           protein.
          Length = 487

 Score =  111 bits (266), Expect = 1e-24
 Identities = 55/113 (48%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
 Frame = +2

Query: 329 GGSALLPLPKSPITLEEKIGLVKKLANSGADIKELNTVRKVISDLKGGQLA-VKAQPAQV 505
           GGSALLPLP+SP+TLE+K  +  KL   GA I+E+N VR   SD+KGG+LA +  Q   +
Sbjct: 151 GGSALLPLPRSPLTLEDKRSIADKLMKRGASIQEINAVRIACSDIKGGRLARLAGQAGLL 210

Query: 506 VSLILSDIVGDPLDLIASGPTVQNTDGANKAVDVLKKYNLIDALPKSVQTLLE 664
           V+ +LSDI+GDPL+LIA GPT+Q  + A    D+LKK+++ + L   ++ + E
Sbjct: 211 VTFVLSDIIGDPLELIACGPTIQ-PEAAASPSDILKKHHVWEELSPEIRRVFE 262



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
 Frame = +3

Query: 66  QIFKSSVSAVLPENL--------IRSSLKYNPTNEHLNILGKTYNLLGKNVYLVGTGKAV 221
           QIF  +V+AV PE +        +R  +  N T+  + + G+  ++ GK  ++VG GKAV
Sbjct: 12  QIFVQAVNAVHPEKVFADFQKFDLRPQIGENATDISIKLNGERQDISGKTCHIVGFGKAV 71

Query: 222 QNMSREVENILQSKIKYGIISIPMGSLDVFNK 317
             M+ +V+  L +    G++S+P+ +L  F +
Sbjct: 72  LGMANKVQQDLGATSAGGVLSVPVNTLKQFQQ 103


>AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA
           protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = -1

Query: 513 SETT*AGCAFTASWPPFKSDITFLTVFNSLISAPELANFFTSPIFSSKVIGDFGKGSNAE 334
           ++TT  G   T + P     + FL  F  L SA ELA   T+  + +  +  F KG N +
Sbjct: 326 TDTTTYGIHITMNLPAMA--VEFLDAFRGLYSADELAQLPTNVCYPTVHVYSFAKGENTK 383


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,844,404
Number of Sequences: 53049
Number of extensions: 512206
Number of successful extensions: 1374
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)