Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18h22
         (517 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063290-1|AAH63290.1| 1066|Homo sapiens zinc finger protein 295...    29   9.7  
AP001745-3|BAA95529.1| 1066|Homo sapiens ZNF295 protein.               29   9.7  
AB041015-1|BAD74064.1|  865|Homo sapiens zinc finger protein sho...    29   9.7  
AB041014-1|BAD74063.1| 1066|Homo sapiens zinc finger protein lon...    29   9.7  
AB033053-1|BAA86541.1| 1069|Homo sapiens KIAA1227 protein protein.     29   9.7  

>BC063290-1|AAH63290.1| 1066|Homo sapiens zinc finger protein 295
            protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 154  TPAVLQMFSLPPARAIFYGVTAVAAL-FKTIFGCMLIHGTFR 276
            TPA  ++F    +  +FY    ++A+ FK  F C L H TF+
Sbjct: 1012 TPATEKLFVPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFK 1053


>AP001745-3|BAA95529.1| 1066|Homo sapiens ZNF295 protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 154  TPAVLQMFSLPPARAIFYGVTAVAAL-FKTIFGCMLIHGTFR 276
            TPA  ++F    +  +FY    ++A+ FK  F C L H TF+
Sbjct: 1012 TPATEKLFVPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFK 1053


>AB041015-1|BAD74064.1|  865|Homo sapiens zinc finger protein short
           form protein.
          Length = 865

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 154 TPAVLQMFSLPPARAIFYGVTAVAAL-FKTIFGCMLIHGTFR 276
           TPA  ++F    +  +FY    ++A+ FK  F C L H TF+
Sbjct: 811 TPATEKLFVPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFK 852


>AB041014-1|BAD74063.1| 1066|Homo sapiens zinc finger protein long
            form protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 154  TPAVLQMFSLPPARAIFYGVTAVAAL-FKTIFGCMLIHGTFR 276
            TPA  ++F    +  +FY    ++A+ FK  F C L H TF+
Sbjct: 1012 TPATEKLFVPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFK 1053


>AB033053-1|BAA86541.1| 1069|Homo sapiens KIAA1227 protein protein.
          Length = 1069

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 154  TPAVLQMFSLPPARAIFYGVTAVAAL-FKTIFGCMLIHGTFR 276
            TPA  ++F    +  +FY    ++A+ FK  F C L H TF+
Sbjct: 1015 TPATEKLFVPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFK 1056


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,143,744
Number of Sequences: 237096
Number of extensions: 1460073
Number of successful extensions: 2177
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2177
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)