Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18h18
(322 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 1.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 2.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 3.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 3.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 3.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 3.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 3.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 3.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 3.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 3.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 3.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 3.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 3.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 3.7
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.2 bits (45), Expect = 1.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 91 YKNMKLIEGKRVILRLQVRKC 153
Y ++K +G + R+QV KC
Sbjct: 111 YNDVKYCDGLTSVYRMQVDKC 131
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 2.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 153 QEDTPKSLGAGTKTSEDIHNRIGYAPKKKPSGP 251
Q+ P + AG + I N GY PK + SGP
Sbjct: 532 QQKIPLRMTAGIDP-KSIFNS-GYRPKPRMSGP 562
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 325 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 364
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 325 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 364
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 325 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 364
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 325 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 364
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 325 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 364
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 325 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 364
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 30 LEERTSRKRYSRSREREQKLYK 51
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 393 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 432
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 NTSSTGAEMQEDTPKSLGAGT-KTSEDIHNRIGYAPKKKPSG 248
N + G E+QE + KSL A +DI ++ A PSG
Sbjct: 393 NRRAKGMELQEKSSKSLLANVLDIDDDIRHKNSAA--NPPSG 432
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 263 LEERTSRKRYSRSREREQKLYK 284
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 136 LQVRKCKKTHQNL*EREQKLVK 201
L+ R +K + EREQKL K
Sbjct: 263 LEERTSRKRYSRSREREQKLYK 284
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,023
Number of Sequences: 438
Number of extensions: 1785
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6968808
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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