Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18h17
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065033-1|AAH65033.1|  146|Homo sapiens FLJ20489 protein protein.     45   2e-04
AY358351-1|AAQ88717.1|  945|Homo sapiens GARS1883 protein.             29   7.9  
AY126437-1|AAM95701.1|  934|Homo sapiens transmembrane receptor ...    29   7.9  
AL359832-2|CAI16737.1|  945|Homo sapiens unc-5 homolog B (C. ele...    29   7.9  
AL359832-1|CAI16738.1|  934|Homo sapiens unc-5 homolog B (C. ele...    29   7.9  
AL359384-3|CAI16089.1|  945|Homo sapiens unc-5 homolog B (C. ele...    29   7.9  
AL359384-2|CAI16090.1|  934|Homo sapiens unc-5 homolog B (C. ele...    29   7.9  
AB096256-1|BAC57998.1|  945|Homo sapiens p53-regulated receptor ...    29   7.9  

>BC065033-1|AAH65033.1|  146|Homo sapiens FLJ20489 protein protein.
          Length = 146

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
 Frame = +2

Query: 158 LRTKIHIALSSIGLVLGVSAFICFCIVYANIEAGMWALLSGINAGLALMLHCHYLKESLH 337
           L+  +  A S I  V G S F+ + +VY          L+G+ A   L+ H  Y+++   
Sbjct: 6   LQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWR 65

Query: 338 VNFSRKSLQYIGDIGII-GFVAGGALMIFYIFLETYYQADVTPIETSIIIRLVWSFMMTK 514
                K L+    +G++   V+  A   F +   T +Q+   P  TS  +  VWSF+  K
Sbjct: 66  TWL--KGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDP--TSYYLSSVWSFISFK 121

Query: 515 WGIML 529
           W  +L
Sbjct: 122 WAFLL 126


>AY358351-1|AAQ88717.1|  945|Homo sapiens GARS1883 protein.
          Length = 945

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 282 IPDSSAHIPASMLAYTMQKHINADTPKTSPIELSAICILVRNIFDNCH 139
           +PDS    PA  L Y +Q+  +A   K  P+EL         I+  C+
Sbjct: 35  LPDSFPSAPAEPLPYFLQEPQDAYIVKNKPVELRCRAFPATQIYFKCN 82


>AY126437-1|AAM95701.1|  934|Homo sapiens transmembrane receptor
           UNC5H2 protein.
          Length = 934

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 282 IPDSSAHIPASMLAYTMQKHINADTPKTSPIELSAICILVRNIFDNCH 139
           +PDS    PA  L Y +Q+  +A   K  P+EL         I+  C+
Sbjct: 35  LPDSFPSAPAEPLPYFLQEPQDAYIVKNKPVELRCRAFPATQIYFKCN 82


>AL359832-2|CAI16737.1|  945|Homo sapiens unc-5 homolog B (C.
           elegans) protein.
          Length = 945

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 282 IPDSSAHIPASMLAYTMQKHINADTPKTSPIELSAICILVRNIFDNCH 139
           +PDS    PA  L Y +Q+  +A   K  P+EL         I+  C+
Sbjct: 35  LPDSFPSAPAEPLPYFLQEPQDAYIVKNKPVELRCRAFPATQIYFKCN 82


>AL359832-1|CAI16738.1|  934|Homo sapiens unc-5 homolog B (C.
           elegans) protein.
          Length = 934

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 282 IPDSSAHIPASMLAYTMQKHINADTPKTSPIELSAICILVRNIFDNCH 139
           +PDS    PA  L Y +Q+  +A   K  P+EL         I+  C+
Sbjct: 35  LPDSFPSAPAEPLPYFLQEPQDAYIVKNKPVELRCRAFPATQIYFKCN 82


>AL359384-3|CAI16089.1|  945|Homo sapiens unc-5 homolog B (C.
           elegans) protein.
          Length = 945

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 282 IPDSSAHIPASMLAYTMQKHINADTPKTSPIELSAICILVRNIFDNCH 139
           +PDS    PA  L Y +Q+  +A   K  P+EL         I+  C+
Sbjct: 35  LPDSFPSAPAEPLPYFLQEPQDAYIVKNKPVELRCRAFPATQIYFKCN 82


>AL359384-2|CAI16090.1|  934|Homo sapiens unc-5 homolog B (C.
           elegans) protein.
          Length = 934

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 282 IPDSSAHIPASMLAYTMQKHINADTPKTSPIELSAICILVRNIFDNCH 139
           +PDS    PA  L Y +Q+  +A   K  P+EL         I+  C+
Sbjct: 35  LPDSFPSAPAEPLPYFLQEPQDAYIVKNKPVELRCRAFPATQIYFKCN 82


>AB096256-1|BAC57998.1|  945|Homo sapiens p53-regulated receptor for
           death and life protein.
          Length = 945

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 282 IPDSSAHIPASMLAYTMQKHINADTPKTSPIELSAICILVRNIFDNCH 139
           +PDS    PA  L Y +Q+  +A   K  P+EL         I+  C+
Sbjct: 35  LPDSFPSAPAEPLPYFLQEPQDAYIVKNKPVELRCRAFPATQIYFKCN 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,382,271
Number of Sequences: 237096
Number of extensions: 1526629
Number of successful extensions: 6871
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6871
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)