Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18g10
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          29   0.038
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      29   0.038
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   4.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   5.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   5.7  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 207 HDTRRFRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYV 362
           + T RFR GL  PQ   G  +  H+    ++  DL    +T +S+  D GYV
Sbjct: 295 YPTMRFRNGLAFPQRETGATVPLHMQKYVQMIHDL----HTRISTAIDLGYV 342


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 207 HDTRRFRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYV 362
           + T RFR GL  PQ   G  +  H+    ++  DL    +T +S+  D GYV
Sbjct: 295 YPTMRFRNGLAFPQRETGATVPLHMQKYVQMIHDL----HTRISTAIDLGYV 342


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 628 HICRTS*SIGAMPVPPAIKFNFLTTTFVGGS 536
           H+  TS +  A P PP++          GG+
Sbjct: 40  HLAGTSTTAAATPTPPSVPVGSAVAGTAGGA 70


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 160 ESTNVINFLLDPLDFFPHRQLAIIVAKTTTDPT 62
           E+ NV+    D LD FP  +  +I A T    T
Sbjct: 262 ETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMT 294


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 160 ESTNVINFLLDPLDFFPHRQLAIIVAKTTTDPT 62
           E+ NV+    D LD FP  +  +I A T    T
Sbjct: 262 ETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMT 294


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 241 LLNMYWDYRSVNIF 282
           LL+++WDY+ +  F
Sbjct: 67  LLSVWWDYKGIVYF 80


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 241 LLNMYWDYRSVNIF 282
           LL+++WDY+ +  F
Sbjct: 189 LLSVWWDYKGIVYF 202


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 97  PIVYGERNLKDLAKS 141
           PIVYG  N++D  K+
Sbjct: 313 PIVYGAFNIRDRNKT 327


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 4/23 (17%), Positives = 17/23 (73%)
 Frame = +2

Query: 374 QGIL*ECTSEVSRGREAVSVLEQ 442
           +G++ +C++ + RG+   +++++
Sbjct: 321 EGVIIDCSNHIGRGKLVTALIQR 343


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 408 PEGGKLSQYLNNMKINDTIDVRG 476
           PEGGKL++ +    ++   D  G
Sbjct: 670 PEGGKLTRLIKRELVDAPADQEG 692


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 337 RAMRIKAMSIWLSRYTLRMYI 399
           R +R+K   I++  + + MY+
Sbjct: 302 RTLRLKGQMIYMDNWKMMMYL 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,694
Number of Sequences: 438
Number of extensions: 3633
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)