Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18g02
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 36 0.030
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 33 0.16
04_01_0301 + 4016588-4016627,4016715-4018837 33 0.21
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 31 0.64
03_01_0191 + 1531107-1531948,1532101-1532233,1532366-1532450,153... 31 1.1
12_02_0213 - 15745459-15745908,15745981-15746559 30 1.5
04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362... 29 2.6
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 29 4.5
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 4.5
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 4.5
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 29 4.5
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 28 6.0
09_01_0128 + 1932721-1935181,1936099-1936256 28 6.0
08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036 28 6.0
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 28 6.0
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 28 6.0
01_06_1261 - 35826513-35828941,35829201-35829294 28 6.0
04_01_0290 + 3843610-3843712,3844088-3846003 28 7.9
03_04_0122 + 17465804-17465893,17466028-17466147,17466287-174663... 28 7.9
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 28 7.9
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085... 28 7.9
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +3
Query: 339 KEPELERMKAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQS 518
KE ++E KAE+ E E E+L T + ++ DYK+ D QTAA S +
Sbjct: 45 KEEKMEAAKAEMGEVREENERLKTMLTRIVSDYKSLHTHFL-DVVKVKEQTAAELSGDDD 103
Query: 519 DNIARDFLS 545
D+ D +S
Sbjct: 104 DDEPDDLVS 112
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 366 AELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQS 518
AELQ KS E+ C + LD+ K +S H LLQ A ES+ +S
Sbjct: 560 AELQTKSSKLEERCVSLSSALDNAKRESVDWKNKYDHNLLQQKADESKLKS 610
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 33.1 bits (72), Expect = 0.21
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 234 KFESVLKDVK-QVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKA-ELQEKSELGEQLC 407
+FE +K +K +++ ++ EKE+ A ++ + + KE E +MK E+Q K +L E
Sbjct: 449 QFEVEVKSLKNELEAFEEEKEV-TAKAFNVEKTEILKELEDLKMKVLEIQAKKDLVESEN 507
Query: 408 TRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEP 587
+Q LD TK + L+ EE+ + A+ F K + K LED +
Sbjct: 508 NVLQ--LDIVTTKQKYNQFEVEIKSLKNELKALEEEKEVTAKAFNVEKAEILKELEDLKR 565
Query: 588 IRKXMHIRKYKAEKMSELLR 647
+ + KY E ++ LR
Sbjct: 566 KVQEIQANKYLVEGENDKLR 585
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 31.5 bits (68), Expect = 0.64
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Frame = +3
Query: 204 ELKEMLNDDAKFESVLKD-VKQVKDWDTEKEMFIASNRSLAEFNLGKEPE-LERMKAELQ 377
ELK +++ + LKD ++QV+ E ++ + +RSL NL E E +E K EL+
Sbjct: 835 ELKLQMDESRSLITNLKDELEQVEAQKVELKLQMDESRSLIT-NLKDELEQVEAQKVELK 893
Query: 378 EKSELGEQLCTRIQELLDDYKTKSAGISPDTTHAL-----LQTAAAESEEQ 515
E + + +QE + + +A + H + LQT A+ ++Q
Sbjct: 894 ENQLESHRRLSEVQEDSEALRRSNAKLQATVDHVVEECKSLQTLTADLKKQ 944
>03_01_0191 +
1531107-1531948,1532101-1532233,1532366-1532450,
1533282-1533502
Length = 426
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +3
Query: 201 NELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQE 380
+E+K+++ D+ E L D K+VK +A+ +S A KE ++ R AEL++
Sbjct: 257 SEMKKIMADEKLAEMALADPKRVK-------RVLANRQSAAR---SKERKM-RYIAELEQ 305
Query: 381 KSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQ 515
K ++ + T + L + SAG++ + A E + Q
Sbjct: 306 KVQILQSEATNLSAQLTMMQRDSAGLATQNNELKFRLHAMEQQAQ 350
>12_02_0213 - 15745459-15745908,15745981-15746559
Length = 342
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +3
Query: 261 KQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTRIQELLDDYK 440
++V + +TE A L E + E++ +KA+LQE+ ++ ++++E L K
Sbjct: 155 RRVGELETEVTDLTAQQLQLEEEHQAWGSEIDSLKAQLQEQLRESQEHVSQLEEPLRAAK 214
Query: 441 TKSAGISPDT 470
+ G S T
Sbjct: 215 ISTTGASTST 224
>04_04_1231 -
31934745-31935125,31935230-31935325,31936215-31936277,
31936393-31936593,31936738-31936839,31936972-31937430,
31937524-31937712,31938325-31938442,31939033-31939307,
31939853-31939930
Length = 653
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 423 LLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKF 569
LLD+++ + A H LL A + E DN+ R S +G D+F
Sbjct: 29 LLDNHQFQQAFQHQQQQHHLLDQIPATTAESGDNMIRSRASDPLGGDEF 77
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +3
Query: 183 LAHLNSNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIAS---NRSLAEFNLGKEPE- 350
L+ +NS + K+ DD + E + K++ + + E + I+S N AE + E
Sbjct: 134 LSFINSGDSKKRAKDDQEHEKLQKEISSLSQENQELKKKISSVLENSDRAESEVASLKEA 193
Query: 351 LERMKAELQEKSELGEQLCTRIQEL 425
L + +AE + +Q R+Q L
Sbjct: 194 LAQQEAEKEAAFSQCQQSSDRLQAL 218
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 201 NELKEMLNDDAKFESVLKDVKQ-VKDWD--TEKEMF-IASNRSLAEFNLGKEPELERMKA 368
++ KE D K+ LK +KQ +K + TEK+ I + E + P+LE
Sbjct: 387 DQFKEFERKDVKYREDLKHLKQKIKKLEDKTEKDTSKIDESTKEVEESSSLIPQLEEEIP 446
Query: 369 ELQEKSELGEQLCTRIQE 422
+LQEK E++ +I+E
Sbjct: 447 KLQEKFNEEEKVLEQIKE 464
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 201 NELKEMLNDDAKFESVLKDVKQ-VKDWDTEKEMFIASNRSL---AEFNLGKEPEL-ERMK 365
NEL+E+L A+ E+ + D+K+ + +TE E + N +L + + EL E+
Sbjct: 1256 NELREVLETVAQKEAEVTDLKEKLVSLETENEKLVGINEALKGELDTKVAMFDELQEQFS 1315
Query: 366 AELQEKSELGEQL 404
+ EK E E+L
Sbjct: 1316 STHAEKEEAAEKL 1328
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +3
Query: 201 NELKEMLND-DAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQ 377
+ +KE + D ES+ V+++KD + E + I ++ S ++ LERM
Sbjct: 387 SSIKEQIQAVDLNVESLQALVQELKDGNVELKGIIRNHESTEVLHIENLRRLERM----S 442
Query: 378 EKSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESE 509
EK+ E+ + + L+ + K A + H + ++ +SE
Sbjct: 443 EKNSYLEKSLSAVTTELEVLREKKAELEESCKHLSSKISSHQSE 486
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 195 NSNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAEL 374
+S E K+ L D + + LKD K+ E+ SN+ + + E EL+ ++
Sbjct: 224 DSKEQKKALKDSKELKKALKDSKEQGSQKDSDELKPKSNKRVTFAEVEPEKELKASNSDW 283
Query: 375 QEKSE 389
SE
Sbjct: 284 HPTSE 288
>09_01_0128 + 1932721-1935181,1936099-1936256
Length = 872
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 189 HLNSNELKEMLNDDAKFESVLKDVKQVKDW 278
H++ + + +L+DDA ES+L VK +W
Sbjct: 610 HMSRAKKRLLLSDDASQESILLQVKNAYEW 639
>08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036
Length = 420
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +3
Query: 234 KFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTR 413
K E + ++ T+ + I + A +E ELE + AE + E T
Sbjct: 73 KLEELKATTSSLRTQKTDLKTKIKGLEATATTLKNREKELEAVLAEKNSRVSQMEATLTD 132
Query: 414 IQELLDDYKTKSAGISPDTTHA---LLQTAAAESEE 512
+ + ++AG +PD A LLQ AE EE
Sbjct: 133 KNSHIRQMEERAAGTNPDQMAALMELLQQKEAELEE 168
>02_04_0625 -
24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 28.3 bits (60), Expect = 6.0
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 345 PELERMKAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDN 524
P ++ +E+ E+G ++ + + + S IS D TH L AAA+S E
Sbjct: 52 PPGRKVLESFREEFEIGGRVISFETGKMARFANGSVVISMDDTHVLSTVAAAKSSEP--- 108
Query: 525 IARDFLSGKMGVDKFLEDF-EPIRKXMHIRKYKAEKMSELL 644
RDFL + VD + + + + ++R+ A K ELL
Sbjct: 109 -VRDFL--PLTVDYQEKQYAQGVIPTTYMRREGAPKERELL 146
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 28.3 bits (60), Expect = 6.0
Identities = 31/109 (28%), Positives = 50/109 (45%)
Frame = +3
Query: 192 LNSNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAE 371
+N N ++ D E + + K++ TEKE FI +S E + K +LE+ +
Sbjct: 250 MNKNTTSAPIDKDNAREEISRLQKEILVMQTEKE-FI---KSSYESGIAKYWDLEKQIND 305
Query: 372 LQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQS 518
+Q EQ+C Q+ D+ SA I D AL+ A +S E +
Sbjct: 306 MQ------EQVC-HFQDKFDE----SAVIEDDEARALMTATALKSCEDT 343
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 204 ELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEK 383
++ ++ D E + + K++ TEKE F +S E +L K +ER AE+QE+
Sbjct: 142 KISSKMSKDKAQEEIERLQKKILVLQTEKEFF----KSSYESSLNKYLSIERQAAEMQEE 197
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Frame = +3
Query: 201 NELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGK-EPELERMKAELQ 377
+E +M+ + +S L++++ D + + S +AE L E E+ER+K EL
Sbjct: 146 DEKAKMMMESVDLKSRLEEIQGNMDMIKSENDKLRSEALVAEQKLNICEAEIERLKMELG 205
Query: 378 EKSELGEQLC----TRIQEL---LDDYKTKSAGISPDTTHALLQTAAAESE 509
+E E T+ +E+ L+D KTK I + A + SE
Sbjct: 206 ALTEANEAAAKAFDTQNEEITKELEDLKTKLEEIKTNKDLAESENGKLRSE 256
>03_04_0122 +
17465804-17465893,17466028-17466147,17466287-17466317,
17466978-17467153,17468051-17468142,17468259-17468340,
17468498-17468566,17468655-17468759,17471246-17471342,
17471438-17471676,17472191-17472949,17473079-17473297
Length = 692
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 654 CCFSTILTFSRLCTSLYAXVYGWVQNLLEIYQH 556
C I+TF +C+ + A VY W+ N + H
Sbjct: 374 CRHPNIITFIGVCSKISALVYEWLPNGRNLEDH 406
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 204 ELKEMLNDDAKFESVLKDVKQVKDWDTEK-EMFIASNRSLAEFNLGKEPELERMKAELQE 380
EL++ + + + E L VK+ K + I SL + L K ELE++ ELQ
Sbjct: 1259 ELQKKVFELEQSEQKLSSVKEKLSIAVAKGKGLIVQRDSLKQTLLEKSGELEKLAHELQS 1318
Query: 381 KSELGEQLCTRIQELLD 431
K L +L +I+ D
Sbjct: 1319 KDSLLIELEAKIKSYAD 1335
>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
22709162-22709206,22709367-22709445,22709522-22709595,
22709703-22709809,22711116-22711301,22711882-22711920,
22712020-22712086,22712207-22712281,22713113-22713347,
22713425-22713755,22714530-22714710,22714810-22714950,
22715041-22715302,22715503-22715892,22717179-22717735,
22718421-22718557,22718672-22718853,22718959-22719339,
22719420-22719545,22719635-22719700,22720056-22721839,
22721914-22722193,22722386-22722616,22723067-22723588,
22723683-22723815,22723937-22724193
Length = 2405
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 498 AESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKXMHIRKYKAEKMSELL 644
++ +Q + RD L +G +KF+E + +RK + +K ++ K SE L
Sbjct: 2320 SDDVKQLADSVRDKLCDLIGTEKFVEVYNSVRKGLK-QKRESRKQSEKL 2367
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,516,802
Number of Sequences: 37544
Number of extensions: 220266
Number of successful extensions: 617
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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