Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18f23
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.4  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   3.2  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   3.2  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   3.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   5.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.3  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 112 IFLASIPFPWICLL*N--GFPKYS 47
           IF+   P PWIC L N  G+  YS
Sbjct: 228 IFVPVKPCPWICELTNDAGYVVYS 251


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +2

Query: 404 HQVFGENENIFGYTDLHIKLYYSAGSLQTYLGIDYTDKI 520
           H++     N + Y + + K  Y     + Y  I+Y ++I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQI 117


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +2

Query: 404 HQVFGENENIFGYTDLHIKLYYSAGSLQTYLGIDYTDKI 520
           H++     N + Y + + K  Y     + Y  I+Y ++I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQI 117


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +2

Query: 404 HQVFGENENIFGYTDLHIKLYYSAGSLQTYLGIDYTDKI 520
           H++     N + Y + + K  Y     + Y  I+Y ++I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYIEQI 117


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 440 YTDLHIKLYYSAGSLQTYL 496
           Y D+H+ ++   G L T+L
Sbjct: 55  YQDVHVMIWIGFGFLMTFL 73


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 189 VNYTPPFLQY*KNIDNKIYAGI 254
           +  TP  +QY ++ +N++YA +
Sbjct: 323 IQITPKRIQYAQHKENELYANL 344


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 189 VNYTPPFLQY*KNIDNKIYAGI 254
           +  TP  +QY ++ +N++YA +
Sbjct: 361 IQITPKRIQYAQHKENELYANL 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,803
Number of Sequences: 438
Number of extensions: 3442
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)