Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18f15
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81107-6|CAB03230.1| 342|Caenorhabditis elegans Hypothetical pr... 172 2e-43
Z93377-8|CAE17791.1| 318|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z72506-5|CAA96616.2| 259|Caenorhabditis elegans Hypothetical pr... 27 7.2
U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerat... 27 7.2
Z70270-5|CAE17743.1| 181|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48717-8|CAA88609.1| 518|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z81107-6|CAB03230.1| 342|Caenorhabditis elegans Hypothetical
protein R07H5.8 protein.
Length = 342
Score = 172 bits (418), Expect = 2e-43
Identities = 79/150 (52%), Positives = 103/150 (68%)
Frame = +2
Query: 71 EGLLVGIGNPLLDISASVDEDLLKKYDLHPDDAIMAEEKHMPLYSELVDKYNAEYIAGGS 250
E L+G+ NPLLDI +V++ L K+ L +DAI+ ++KH +++EL + EYI GG+
Sbjct: 6 ENTLIGMCNPLLDIQTTVEKAFLDKWGLKENDAILCDDKHNDMFTELTRDFKVEYIPGGA 65
Query: 251 VQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERAIADGVHVQYQVSNEVATGTCAVL 430
QNSLRVAQWIL PN +FG VG D+Y LL +A GV+V YQ++ V TGTCA L
Sbjct: 66 AQNSLRVAQWILNAPNRTVFFGAVGKDQYGDLLASKAKEAGVNVHYQINETVKTGTCAAL 125
Query: 431 VTGTHRSLCANLGAAQHFTPDHLQKEXMQE 520
+ GTHRSLCA+L AA FT DHLQKE Q+
Sbjct: 126 INGTHRSLCAHLAAANTFTQDHLQKEENQK 155
Score = 35.5 bits (78), Expect = 0.027
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 372 ESTFNIKYQMR*QLVHVQC**LVHTAH---CAPISVLHNTSHQIIYRKKXCKKSIEAAKF 542
E+ N+ YQ+ + C L++ H CA ++ NT Q +K+ +K IE AK+
Sbjct: 104 EAGVNVHYQINETVKTGTCAALINGTHRSLCAHLAAA-NTFTQDHLQKEENQKIIEQAKY 162
Query: 543 FYASGFXVAV 572
FY +GF + V
Sbjct: 163 FYVTGFFITV 172
>Z93377-8|CAE17791.1| 318|Caenorhabditis elegans Hypothetical
protein F13A7.12 protein.
Length = 318
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 308 YFGCVGNDEYAKLLKERAIADGVHVQYQVSNEVATGTCAVLVTGTHRSLCANLGAAQHFT 487
++G + EY K L E+ + G + QY VS+ + G AVL ++ +A F
Sbjct: 151 FYGADPSSEYNKDLYEKDLK-GKYYQYAVSDRNSMGMSAVLGDNGYKDQVTQHISASQFF 209
Query: 488 PDHLQKE 508
+ +QK+
Sbjct: 210 KNIIQKD 216
>Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical
protein F56H6.6 protein.
Length = 388
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 290 SLESIVLLLMNSERFHQQYTLHYTCQRVPSRVACVFLQP 174
+LE + +L + F ++ T+HY + PS++ C + P
Sbjct: 104 ALEYVAMLHQCDKEFGEKVTVHYVFRTSPSQMDCPVITP 142
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Frame = +2
Query: 134 LLKKYDLHPDDAIMAEEKHMPLYSELVDKYNAEYIAG-GSVQNSLRVAQWILKKPNIC-T 307
L ++D P + E+ + + G G V +S L PN C
Sbjct: 159 LSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTGYGRVPSSCCNEHGKLSYPNNCGR 218
Query: 308 YFGCVGNDEYAKLLKERAIADGVHVQYQVSNEVATGTCAVL 430
F + YA+ + R AD V+ S + G C VL
Sbjct: 219 SFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVL 259
>Z72506-5|CAA96616.2| 259|Caenorhabditis elegans Hypothetical
protein F07A5.4 protein.
Length = 259
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 403 GSNWYMCSASNWYTPLTVRQSRCCTTLHTRS 495
G +W++C S+ YT L+ + +R + TR+
Sbjct: 131 GGHWHVCEMSHGYTMLSFKGNRRLNSSETRA 161
>U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerate
kinase protein 1 protein.
Length = 417
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +2
Query: 197 LYSELVDKYNAEYIAGGSVQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERAIADGV 376
L L+DK N I GG L+VAQ + ++ G +E + K + + +
Sbjct: 222 LIKNLLDKVNEMIIGGGMAYTFLKVAQGVKIGNSLYDEEGAKIVNELLEAAKAKGVQIHL 281
Query: 377 HVQYQVSNEVATGTCAVLVT 436
V + ++++ A + VT
Sbjct: 282 PVDFVIADKFAEDATSKTVT 301
>Z70270-5|CAE17743.1| 181|Caenorhabditis elegans Hypothetical
protein C53D6.8 protein.
Length = 181
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 159 GCRSYFFSKSSSTLADMSNKGFPMPTNNPSWSHMESETS 43
GCR + S L ++N G P+ N P W + E S
Sbjct: 36 GCRCLQKDQRSQLLNSLTN-GIPLNANRPIWKPLSREPS 73
>Z48717-8|CAA88609.1| 518|Caenorhabditis elegans Hypothetical
protein T10B9.10 protein.
Length = 518
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 107 PTKDSLCPLIILLGHIWNQKRPLCNTSCGRKS 12
P K+ PL+ GH W + R L + + KS
Sbjct: 109 PNKNKRVPLVAAQGHRWKRLRTLASPTFSNKS 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,040,034
Number of Sequences: 27780
Number of extensions: 269371
Number of successful extensions: 764
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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