Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18f14
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 55 8e-09
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 54 2e-08
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 46 5e-06
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 45 8e-06
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 43 4e-05
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 32 0.083
SPBC119.16c |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.1
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 25 7.2
SPAC5D6.06c |||UDP-GlcNAc transferase associated protein Alg14|S... 25 9.5
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 25 9.5
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 55.2 bits (127), Expect = 8e-09
Identities = 33/152 (21%), Positives = 72/152 (47%)
Frame = +3
Query: 126 WMVALLANTTLLTYGLQAGWISPMTKTLQSESSPTGAALSDNDISLVASMLCLSAMLGVA 305
W+++ +A + L +G G IS L S+ G LS L+ S +A++
Sbjct: 82 WVLSAVAGISGLLFGYDTGVISGALAVLGSD---LGHVLSSGQKELITSATSFAALISAT 138
Query: 306 MFAYIADTYGRRVCIMTIAALQALSWLVKLCTSSFSGLLIARVLCGIPSGGCFNIIPVYV 485
++AD GR+ ++ A+ + ++ + + + +++ R + G G I+P+Y+
Sbjct: 139 TSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYI 198
Query: 486 KEISQDNIRGVLGTLLILMQNVGILSMFALGS 581
E++ +RG L + ++ G L ++L +
Sbjct: 199 TELAPARLRGRLVIIYVVFITGGQLIAYSLNA 230
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 53.6 bits (123), Expect = 2e-08
Identities = 37/143 (25%), Positives = 66/143 (46%)
Frame = +3
Query: 126 WMVALLANTTLLTYGLQAGWISPMTKTLQSESSPTGAALSDNDISLVASMLCLSAMLGVA 305
W++A A L +G G IS + + S G L++ + S L A+LG
Sbjct: 88 WVLAFAAGIGGLLFGYDTGVISGALVVIGT--SLGGHELTNGGKEFITSATSLGALLGGI 145
Query: 306 MFAYIADTYGRRVCIMTIAALQALSWLVKLCTSSFSGLLIARVLCGIPSGGCFNIIPVYV 485
+ +AD +GR+ I + + + +V++ +++ R + G G IIP+Y+
Sbjct: 146 IAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYL 205
Query: 486 KEISQDNIRGVLGTLLILMQNVG 554
EI+ IRG L + +L+ G
Sbjct: 206 SEIAPSKIRGRLVIIYVLLITAG 228
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 46.0 bits (104), Expect = 5e-06
Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Frame = +3
Query: 237 ALSDNDISLVASMLCLSAMLGVAMFAYIADTYGRRVCIMTIAALQALSWLVKL-CTSSFS 413
+LS L+ M+ + ++ G + + IAD +G+R+ I+ A+ + +V++ S+
Sbjct: 56 SLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWV 115
Query: 414 GLLIARVLCGIPSGGCFNIIPVYVKEISQDNIRG--VLGTLLILMQNVGILSMFALGSRL 587
+++A++ GI G + P Y E + +IRG V+ L + + I + +G+
Sbjct: 116 QIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIFIAACINMGTHK 175
Query: 588 XYHTVLW 608
+ T W
Sbjct: 176 LHKTAQW 182
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 45.2 bits (102), Expect = 8e-06
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 261 LVASMLCLSAMLGVAMFAYIADTYGRRVCIMTIAALQALSWLVKLCT-SSFSGLLIARVL 437
L+ M+ +G + + + D +G+R CIM + +V+L T S+ +++A++
Sbjct: 60 LLVGMVNTGTTVGCLLSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPSWVQMMVAKIW 119
Query: 438 CGIPSGGCFNIIPVYVKEISQDNIRGVLGTLLILMQNVGI 557
G+ G I P Y E S +IRG + T L +GI
Sbjct: 120 TGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFITLGI 159
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 42.7 bits (96), Expect = 4e-05
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 261 LVASMLCLSAMLGVAMFAYIADTYGRRVCIMTIAALQALSWLVKLCT-SSFSGLLIARVL 437
L+ M+ + + G + + +AD G+R+ I+ + + ++++ T S+ +L+A++
Sbjct: 28 LITGMVNVGSFFGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTVPSWVQILVAKIW 87
Query: 438 CGIPSGGCFNIIPVYVKEISQDNIRGVLGTLLILMQNVGI 557
G+ G I P Y E++ +RG + T L +GI
Sbjct: 88 TGLSIGALSVITPGYQSEVAPAIMRGAIVTTYQLFITLGI 127
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 31.9 bits (69), Expect = 0.083
Identities = 20/102 (19%), Positives = 43/102 (42%)
Frame = +3
Query: 249 NDISLVASMLCLSAMLGVAMFAYIADTYGRRVCIMTIAALQALSWLVKLCTSSFSGLLIA 428
+ +S A+ +S +F D YGR+ ++ + + + + S L+ A
Sbjct: 124 SQVSWTATAYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQLVAA 183
Query: 429 RVLCGIPSGGCFNIIPVYVKEISQDNIRGVLGTLLILMQNVG 554
R + GI GG + + + + +I RG ++ + +G
Sbjct: 184 RAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIG 225
>SPBC119.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 26.2 bits (55), Expect = 4.1
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 141 LANT-TLLTYGLQAGWISPMTKT-LQSESSPTGAALSDNDISLVAS 272
LANT TLL L+ GWI+ T T L S+SS AL D S A+
Sbjct: 249 LANTSTLLDNDLEEGWIACTTDTVLLSKSSLYDLALYWPDNSFNAN 294
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 255 ISLVASMLCLSAMLGVAMFAYIADTYGRR 341
+ L A++ + MLG +F+ +++ YGRR
Sbjct: 77 VVLGATLYVIGVMLGPLIFSPLSELYGRR 105
>SPAC5D6.06c |||UDP-GlcNAc transferase associated protein
Alg14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 246 RIAQHQWATTQIATFWSLVKS 184
R + W TT FWSL+ S
Sbjct: 101 RYVKQSWLTTPFTAFWSLLGS 121
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/74 (20%), Positives = 33/74 (44%)
Frame = +3
Query: 258 SLVASMLCLSAMLGVAMFAYIADTYGRRVCIMTIAALQALSWLVKLCTSSFSGLLIARVL 437
+L S++ + +G + + +++ GRR+ + + + + + + LLI R
Sbjct: 140 NLSCSLMVVGFGIGPLVISPLSEMIGRRIVYLVTLMIYIVLQIPCALAPNIACLLIVRFF 199
Query: 438 CGIPSGGCFNIIPV 479
C GCF P+
Sbjct: 200 C-----GCFGCTPL 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,748,007
Number of Sequences: 5004
Number of extensions: 56302
Number of successful extensions: 153
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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