Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18f11
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein. 34 0.33
Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein. 31 2.3
D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein. 31 2.3
BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein. 31 2.3
AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein. 31 2.3
AC073275-1|AAQ93366.1| 111|Homo sapiens unknown protein. 31 4.1
L42572-1|AAA85336.1| 758|Homo sapiens transmembrane protein pro... 30 5.4
D21094-1|BAA04656.1| 758|Homo sapiens motor protein protein. 30 5.4
D21092-1|BAA04654.1| 721|Homo sapiens motor protein protein. 30 5.4
CR456793-1|CAG33074.1| 758|Homo sapiens IMMT protein. 30 5.4
BX537369-1|CAD97612.1| 747|Homo sapiens hypothetical protein pr... 30 5.4
BC002412-1|AAH02412.1| 758|Homo sapiens inner membrane protein,... 30 5.4
AY232292-1|AAP69987.1| 757|Homo sapiens proliferation-inducing ... 30 5.4
>AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.
Length = 2785
Score = 34.3 bits (75), Expect = 0.33
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 296 QKMQESVTNAVENMSNRFTDS-GYGVRDCVTSHSNDVSALFHEAITKATSCVSDRLKEAN 472
+ ++++ T+A + + N TD G + DV AL+HE + T C +RL N
Sbjct: 761 EHLEKAATHAEKELQNDMTDEKSVGDESWEQTQEGDVGALYHEQLALKTDC-QERLDHTN 819
Query: 473 DQILGFTAI 499
+ L + A+
Sbjct: 820 FRFLLWRAL 828
>Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.
Length = 1071
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 117 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 209
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.
Length = 1071
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 117 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 209
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.
Length = 1071
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 117 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 209
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.
Length = 1071
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 117 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 209
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>AC073275-1|AAQ93366.1| 111|Homo sapiens unknown protein.
Length = 111
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 436 CFCYCLVKQGTNVVT--VRCYTIPNTISRI-CKSIRHIFYSVCDAFLHFLYIV 287
C C + K+ T + ++C +PNT + I +F +CD F HF++ +
Sbjct: 39 CVCIYIYKRKTYIYFNYLKCKNLPNTNGKSDVYYIILLFVHLCDLFTHFMFFI 91
>L42572-1|AAA85336.1| 758|Homo sapiens transmembrane protein
protein.
Length = 758
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 346
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 347 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 484
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>D21094-1|BAA04656.1| 758|Homo sapiens motor protein protein.
Length = 758
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 346
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 347 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 484
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>D21092-1|BAA04654.1| 721|Homo sapiens motor protein protein.
Length = 721
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 346
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 238 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 297
Query: 347 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 484
D V+ + S V + +HE + +A L ++L
Sbjct: 298 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 344
>CR456793-1|CAG33074.1| 758|Homo sapiens IMMT protein.
Length = 758
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 346
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 347 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 484
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>BX537369-1|CAD97612.1| 747|Homo sapiens hypothetical protein
protein.
Length = 747
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 346
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 264 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 323
Query: 347 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 484
D V+ + S V + +HE + +A L ++L
Sbjct: 324 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 370
>BC002412-1|AAH02412.1| 758|Homo sapiens inner membrane protein,
mitochondrial (mitofilin) protein.
Length = 758
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 346
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 347 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 484
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>AY232292-1|AAP69987.1| 757|Homo sapiens proliferation-inducing
gene 4 protein.
Length = 757
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 346
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 274 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 333
Query: 347 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 484
D V+ + S V + +HE + +A L ++L
Sbjct: 334 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 380
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,912,021
Number of Sequences: 237096
Number of extensions: 1703591
Number of successful extensions: 4310
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4310
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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