Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18f11
(596 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p pro... 30 2.1
AY060925-1|AAL28473.1| 167|Drosophila melanogaster GM06601p pro... 30 2.1
AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein... 30 2.1
AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-P... 30 2.1
AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-P... 30 2.1
BT022855-1|AAY55271.1| 528|Drosophila melanogaster IP13087p pro... 30 2.7
BT022843-1|AAY55259.1| 667|Drosophila melanogaster IP12987p pro... 30 2.7
BT022818-1|AAY55234.1| 667|Drosophila melanogaster IP13187p pro... 30 2.7
AE014297-2218|AAF55322.2| 667|Drosophila melanogaster CG14885-P... 30 2.7
AE014297-2217|ABI31174.1| 667|Drosophila melanogaster CG14885-P... 30 2.7
AE014297-3561|AAF56307.1| 272|Drosophila melanogaster CG13622-P... 29 3.6
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-... 29 4.8
BT003475-1|AAO39478.1| 131|Drosophila melanogaster RE63453p pro... 29 6.3
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr... 29 6.3
M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha... 28 8.4
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros... 28 8.4
BT022130-1|AAY51525.1| 530|Drosophila melanogaster IP08855p pro... 28 8.4
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro... 28 8.4
AE014296-1982|AAF50042.1| 530|Drosophila melanogaster CG7368-PB... 28 8.4
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA... 28 8.4
>BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p
protein.
Length = 1034
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 817 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 874
Query: 344 RF 349
++
Sbjct: 875 KW 876
>AY060925-1|AAL28473.1| 167|Drosophila melanogaster GM06601p
protein.
Length = 167
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 70 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 127
Query: 344 RF 349
++
Sbjct: 128 KW 129
>AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein
protein.
Length = 1030
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 814 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 871
Query: 344 RF 349
++
Sbjct: 872 KW 873
>AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-PB,
isoform B protein.
Length = 992
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 784 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 841
Query: 344 RF 349
++
Sbjct: 842 KW 843
>AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-PD,
isoform D protein.
Length = 1025
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 817 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 874
Query: 344 RF 349
++
Sbjct: 875 KW 876
>BT022855-1|AAY55271.1| 528|Drosophila melanogaster IP13087p
protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 374 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 426
>BT022843-1|AAY55259.1| 667|Drosophila melanogaster IP12987p
protein.
Length = 667
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>BT022818-1|AAY55234.1| 667|Drosophila melanogaster IP13187p
protein.
Length = 667
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>AE014297-2218|AAF55322.2| 667|Drosophila melanogaster CG14885-PC,
isoform C protein.
Length = 667
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>AE014297-2217|ABI31174.1| 667|Drosophila melanogaster CG14885-PB,
isoform B protein.
Length = 667
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>AE014297-3561|AAF56307.1| 272|Drosophila melanogaster CG13622-PA
protein.
Length = 272
Score = 29.5 bits (63), Expect = 3.6
Identities = 32/161 (19%), Positives = 68/161 (42%), Gaps = 4/161 (2%)
Frame = +2
Query: 119 PAILGQRELDLYGNTRKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQ 298
P++ Q L ++ +L+ DF AT + + +S Q + Q R K+
Sbjct: 44 PSVKNQPRFGLGHSSTELVNDFSRRNSTATTVSHCSSCSCSSSQQRQ--QSRAKVLRWGW 101
Query: 299 KMQESVTNAVENMSNRFTDSG--YGVRDCVTSH--SNDVSALFHEAITKATSCVSDRLKE 466
+ + + N R+TD+ Y CV S S ++ T + V ++
Sbjct: 102 ERTGGIDTSNTNHHERYTDNRRLYEQSACVASRQRSQGQGQVYSGNSTPSPRPVQYPKQQ 161
Query: 467 ANDQILGFTAIVNNAVQSSXKALDDMREMYPRRKFSYNGLV 589
AND++ A+ + + ++ + D+R+ R + +Y+ ++
Sbjct: 162 ANDELQQLKALQHFRLMNTSECFSDVRQDKLRLQRAYDKII 202
>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
protein.
Length = 16223
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 436 CFCYCLVKQGTNVVTVRCYTIPNTISR 356
C C CL++QG + T C T N+I +
Sbjct: 10306 CECTCLLEQGKDSCTCNCMTDTNSIDK 10332
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 436 CFCYCLVKQGTNVVTVRCYTIPNTI 362
C C CL++QG + T C T N+I
Sbjct: 969 CECTCLLEQGNDSCTCNCMTDTNSI 993
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 436 CFCYCLVKQGTNVVTVRCYTIPNTI 362
C C CL++QG + T C T N+I
Sbjct: 9488 CECTCLLEQGKDSCTCNCMTDTNSI 9512
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 436 CFCYCLVKQGTNVVTVRCYTIPNTI 362
C C CL++QG + T C T N+I
Sbjct: 10931 CECTCLLEQGKDSCTCNCMTDTNSI 10955
>BT003475-1|AAO39478.1| 131|Drosophila melanogaster RE63453p
protein.
Length = 131
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/79 (25%), Positives = 32/79 (40%)
Frame = -3
Query: 411 RALTSLLCDVTQSRTPYPESVNLLDIFSTAFVTLSCIFCISFEILSLICFASSCSPDVNP 232
R T++ + P+ +LL + SC FC + + S +CF C P
Sbjct: 13 RPKTTITATLAIEMPSQPKLASLLAVLVLLCYCDSCFFCYAGKFSSSLCFLFFCVP---- 68
Query: 231 LMASLASSVAFCRFSTKSS 175
S SS F + ST+ +
Sbjct: 69 --FSFGSSFFFTKTSTRQT 85
>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
protein.
Length = 5327
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/155 (16%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Frame = +2
Query: 134 QRELDLYGNTRKLIEDFVE-NLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQE 310
+ ++++ ++ K +E+ V+ ++++A D++ T ++ +I+ + +I +
Sbjct: 3994 ESKVEVLESSVKQVEEKVQTSVKQAETTVTDSLEQLTKKSSEQLTEIKSVLDTNISNVTN 4053
Query: 311 SVTNAVENMSNRFTDSGYGVRDCVTSHSNDVSALFHEAITKATSCVS-------DRLKEA 469
+ AVE + + D V + T H ++ E+ T+ + S L+E
Sbjct: 4054 LFSTAVETIEKKVQDVTEKVIEKATEHVSEHVTTTGESSTETSQEKSSLDLGTFSELRET 4113
Query: 470 NDQILGFTAIVNNAVQSSXKALDDMREMYPRRKFS 574
+ +G + L D++E +FS
Sbjct: 4114 HITTVGSPEFTVTICERDEPVLHDIKEEDEEHRFS 4148
>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
protein.
Length = 1639
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSXKAL 535
H+ TKA + LKEAN +++ GF + V + +S+ KAL
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKAL 1418
>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
Drosophila mRNA forlaminin B2 chain. ).
Length = 1639
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSXKAL 535
H+ TKA + LKEAN +++ GF + V + +S+ KAL
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKAL 1418
>BT022130-1|AAY51525.1| 530|Drosophila melanogaster IP08855p
protein.
Length = 530
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 203 ATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAV 328
AT A DA+ TSG Q + +Q++ + Q++ + + NA+
Sbjct: 132 ATSAATDALQAGTSGQQQQQQQMQQQQVTAPQELTQDLCNAI 173
>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p protein.
Length = 1639
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSXKAL 535
H+ TKA + LKEAN +++ GF + V + +S+ KAL
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKAL 1418
>AE014296-1982|AAF50042.1| 530|Drosophila melanogaster CG7368-PB
protein.
Length = 530
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 203 ATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAV 328
AT A DA+ TSG Q + +Q++ + Q++ + + NA+
Sbjct: 132 ATSAATDALQAGTSGQQQQQQQMQQQQVTAPQELTQDLCNAI 173
>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
protein.
Length = 1639
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSXKAL 535
H+ TKA + LKEAN +++ GF + V + +S+ KAL
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKAL 1418
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,399,448
Number of Sequences: 53049
Number of extensions: 529115
Number of successful extensions: 1871
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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