Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18f08
         (282 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01833-1|AAA61932.1|  320|Homo sapiens protein ( Human nucleotid...    88   4e-18
BC109323-1|AAI09324.1|  320|Homo sapiens nucleotide binding prot...    88   4e-18
BC100290-1|AAI00291.1|  309|Homo sapiens NUBP1 protein protein.        88   4e-18
BC109322-1|AAI09323.1|  320|Homo sapiens nucleotide binding prot...    85   4e-17
AK223204-1|BAD96924.1|  320|Homo sapiens nucleotide binding prot...    85   4e-17

>U01833-1|AAA61932.1|  320|Homo sapiens protein ( Human
           nucleotide-binding protein mRNA, complete cds. ).
          Length = 320

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 38/91 (41%), Positives = 52/91 (57%)
 Frame = +2

Query: 8   DCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHXILIXXXXXXX 187
           DCPG  S  AG+ ++C GCPNQ +CASG  + PD A+E IK+++  VKH IL+       
Sbjct: 7   DCPGADSAQAGRGASCQGCPNQRLCASGAGATPDTAIEEIKEKMKTVKHKILVLSGKGGV 66

Query: 188 XXXXXXXXIGHGLASMSPDINVGILDXDICG 280
                   + HGLA    +  + +LD DICG
Sbjct: 67  GKSTFSAHLAHGLAE-DENTQIALLDIDICG 96


>BC109323-1|AAI09324.1|  320|Homo sapiens nucleotide binding protein
           1 (MinD homolog, E. coli) protein.
          Length = 320

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 38/91 (41%), Positives = 52/91 (57%)
 Frame = +2

Query: 8   DCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHXILIXXXXXXX 187
           DCPG  S  AG+ ++C GCPNQ +CASG  + PD A+E IK+++  VKH IL+       
Sbjct: 7   DCPGADSAQAGRGASCQGCPNQRLCASGAGATPDTAIEEIKEKMKTVKHKILVLSGKGGV 66

Query: 188 XXXXXXXXIGHGLASMSPDINVGILDXDICG 280
                   + HGLA    +  + +LD DICG
Sbjct: 67  GKSTFSAHLAHGLAE-DENTQIALLDIDICG 96


>BC100290-1|AAI00291.1|  309|Homo sapiens NUBP1 protein protein.
          Length = 309

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 38/91 (41%), Positives = 52/91 (57%)
 Frame = +2

Query: 8   DCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHXILIXXXXXXX 187
           DCPG  S  AG+ ++C GCPNQ +CASG  + PD A+E IK+++  VKH IL+       
Sbjct: 7   DCPGADSAQAGRGASCQGCPNQRLCASGAGATPDTAIEEIKEKMKTVKHKILVLSGKGGV 66

Query: 188 XXXXXXXXIGHGLASMSPDINVGILDXDICG 280
                   + HGLA    +  + +LD DICG
Sbjct: 67  GKSTFSAHLAHGLAE-DENTQIALLDIDICG 96


>BC109322-1|AAI09323.1|  320|Homo sapiens nucleotide binding protein
           1 (MinD homolog, E. coli) protein.
          Length = 320

 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 37/91 (40%), Positives = 51/91 (56%)
 Frame = +2

Query: 8   DCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHXILIXXXXXXX 187
           DCPG  S  AG+ ++C GCPNQ +CASG  +  D A+E IK+++  VKH IL+       
Sbjct: 7   DCPGADSAQAGRGASCQGCPNQRLCASGAGATADTAIEEIKEKMKTVKHKILVLSGKGGV 66

Query: 188 XXXXXXXXIGHGLASMSPDINVGILDXDICG 280
                   + HGLA    +  + +LD DICG
Sbjct: 67  GKSTFSAHLAHGLAE-DENTQIALLDIDICG 96


>AK223204-1|BAD96924.1|  320|Homo sapiens nucleotide binding protein
           1 (MinD homolog, E. coli) variant protein.
          Length = 320

 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 37/91 (40%), Positives = 51/91 (56%)
 Frame = +2

Query: 8   DCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHXILIXXXXXXX 187
           DCPG  S  AG+ ++C GCPNQ +CASG  +  D A+E IK+++  VKH IL+       
Sbjct: 7   DCPGADSAQAGRGASCQGCPNQRLCASGAGATADTAIEEIKEKMKTVKHKILVLSGKGGV 66

Query: 188 XXXXXXXXIGHGLASMSPDINVGILDXDICG 280
                   + HGLA    +  + +LD DICG
Sbjct: 67  GKSTFSAHLAHGLAE-DENTQIALLDIDICG 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,521,407
Number of Sequences: 237096
Number of extensions: 702112
Number of successful extensions: 1706
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)