BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18e23
(466 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071745-1|AAL49367.1| 150|Drosophila melanogaster RH49748p pro... 101 5e-22
AY070643-1|AAL48114.1| 150|Drosophila melanogaster RH02823p pro... 101 5e-22
AE014134-472|AAN10414.1| 126|Drosophila melanogaster CG2862-PB,... 101 5e-22
AE014134-471|AAF51208.2| 150|Drosophila melanogaster CG2862-PA,... 101 5e-22
AY084194-1|AAL89932.1| 370|Drosophila melanogaster RH07106p pro... 31 1.0
AE014298-2410|ABC67186.1| 139|Drosophila melanogaster CG34015-P... 31 1.0
AE014297-1786|AAF55010.1| 370|Drosophila melanogaster CG3061-PA... 31 1.0
AE014297-2661|AAF55667.1| 139|Drosophila melanogaster CG5316-PA... 29 4.1
AE014297-2660|AAN13800.1| 662|Drosophila melanogaster CG5316-PC... 29 4.1
AE014297-2659|AAF55666.2| 662|Drosophila melanogaster CG5316-PB... 29 4.1
AY118832-1|AAM50692.1| 663|Drosophila melanogaster GM01362p pro... 28 5.4
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA... 27 9.4
>AY071745-1|AAL49367.1| 150|Drosophila melanogaster RH49748p
protein.
Length = 150
Score = 101 bits (242), Expect = 5e-22
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = +1
Query: 169 SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQAPVHFLVIPKRRI 348
+ EV ++ +T TIF KI+ KEI I+EDD C+AF+D+APQAP HFLVIP++ I
Sbjct: 26 ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLVIPRKPI 84
Query: 349 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNN 465
A+L AE+ D +LLGHLMLV R + + G+R+V+NN
Sbjct: 85 AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINN 124
>AY070643-1|AAL48114.1| 150|Drosophila melanogaster RH02823p
protein.
Length = 150
Score = 101 bits (242), Expect = 5e-22
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = +1
Query: 169 SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQAPVHFLVIPKRRI 348
+ EV ++ +T TIF KI+ KEI I+EDD C+AF+D+APQAP HFLVIP++ I
Sbjct: 26 ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLVIPRKPI 84
Query: 349 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNN 465
A+L AE+ D +LLGHLMLV R + + G+R+V+NN
Sbjct: 85 AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINN 124
>AE014134-472|AAN10414.1| 126|Drosophila melanogaster CG2862-PB,
isoform B protein.
Length = 126
Score = 101 bits (242), Expect = 5e-22
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = +1
Query: 169 SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQAPVHFLVIPKRRI 348
+ EV ++ +T TIF KI+ KEI I+EDD C+AF+D+APQAP HFLVIP++ I
Sbjct: 2 ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLVIPRKPI 60
Query: 349 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNN 465
A+L AE+ D +LLGHLMLV R + + G+R+V+NN
Sbjct: 61 AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINN 100
>AE014134-471|AAF51208.2| 150|Drosophila melanogaster CG2862-PA,
isoform A protein.
Length = 150
Score = 101 bits (242), Expect = 5e-22
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = +1
Query: 169 SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQAPVHFLVIPKRRI 348
+ EV ++ +T TIF KI+ KEI I+EDD C+AF+D+APQAP HFLVIP++ I
Sbjct: 26 ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLVIPRKPI 84
Query: 349 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNN 465
A+L AE+ D +LLGHLMLV R + + G+R+V+NN
Sbjct: 85 AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINN 124
>AY084194-1|AAL89932.1| 370|Drosophila melanogaster RH07106p
protein.
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 238 SKEIRADIIYEDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARS 417
S+ +ADI E+ + FN PQ VH +R+ AR +D E N++ L +L+ +
Sbjct: 199 SRGFQADISAEELFNMFFNGGFPQQNVHMRQQRRRQQAR-EDREGNNSSALVNLLPIVLL 257
Query: 418 LG 423
+G
Sbjct: 258 IG 259
>AE014298-2410|ABC67186.1| 139|Drosophila melanogaster CG34015-PA
protein.
Length = 139
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 268 EDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELL 390
E+D + F DI P + H+L + K+ A L+D + + L+
Sbjct: 24 ENDDFVIFQDIKPASQHHYLAVTKKHYASLKDLNKSHDSLV 64
>AE014297-1786|AAF55010.1| 370|Drosophila melanogaster CG3061-PA
protein.
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 238 SKEIRADIIYEDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARS 417
S+ +ADI E+ + FN PQ VH +R+ AR +D E N++ L +L+ +
Sbjct: 199 SRGFQADISAEELFNMFFNGGFPQQNVHMRQQRRRQQAR-EDREGNNSSALVNLLPIVLL 257
Query: 418 LG 423
+G
Sbjct: 258 IG 259
>AE014297-2661|AAF55667.1| 139|Drosophila melanogaster CG5316-PA,
isoform A protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 256 DIIYEDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSL 420
++I ++ + D P+A H+LV+P I + + LL L L+AR++
Sbjct: 16 NLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLSLLEELHLLARNV 70
>AE014297-2660|AAN13800.1| 662|Drosophila melanogaster CG5316-PC,
isoform C protein.
Length = 662
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 256 DIIYEDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSL 420
++I ++ + D P+A H+LV+P I + + LL L L+AR++
Sbjct: 16 NLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLSLLEELHLLARNV 70
>AE014297-2659|AAF55666.2| 662|Drosophila melanogaster CG5316-PB,
isoform B protein.
Length = 662
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 256 DIIYEDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSL 420
++I ++ + D P+A H+LV+P I + + LL L L+AR++
Sbjct: 16 NLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLSLLEELHLLARNV 70
>AY118832-1|AAM50692.1| 663|Drosophila melanogaster GM01362p
protein.
Length = 663
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 256 DIIYEDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSL 420
++I ++ + D P+A H+LV+P I + + LL L L+AR++
Sbjct: 16 NLIISSEIAVVIADKFPKAQHHYLVLPLDDIPSIFHLNRSHLSLLEELHLLARNV 70
>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
protein.
Length = 3396
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 129 SVSGFCCGCEAAVQRRSPQSTRNDHYDRAHNIRQD 233
S GF CGC Q + T H +R+ + +D
Sbjct: 837 SPGGFACGCNTGYQLYTSNGTAGYHIERSESGERD 871
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,256,223
Number of Sequences: 53049
Number of extensions: 400628
Number of successful extensions: 950
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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