Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18e19
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005270-1|AAH05270.1| 175|Homo sapiens NADH dehydrogenase (ubi... 135 1e-31
AF020351-1|AAB87865.1| 175|Homo sapiens NADH:ubiquinone oxidore... 135 1e-31
DQ100870-1|AAZ08876.1| 113|Homo sapiens immunoglobulin heavy ch... 31 3.2
AB067079-1|BAC02117.1| 118|Homo sapiens immunoglobulin heavy ch... 30 7.5
DQ454480-1|ABE66564.1| 90|Homo sapiens immunoglobulin heavy ch... 29 9.9
BC142966-1|AAI42967.1| 270|Homo sapiens transmembrane protein 1... 29 9.9
BC112278-1|AAI12279.1| 702|Homo sapiens nucleolar protein 9 pro... 29 9.9
BC110849-1|AAI10850.1| 702|Homo sapiens nucleolar protein 9 pro... 29 9.9
BC105095-1|AAI05096.1| 702|Homo sapiens nucleolar protein 9 pro... 29 9.9
BC094836-1|AAH94836.1| 525|Homo sapiens NOL9 protein protein. 29 9.9
BC063639-1|AAH63639.1| 414|Homo sapiens NOL9 protein protein. 29 9.9
BC009257-1|AAH09257.2| 430|Homo sapiens NOL9 protein protein. 29 9.9
AL591866-4|CAI16071.1| 702|Homo sapiens novel protein protein. 29 9.9
AL034423-8|CAI19385.1| 267|Homo sapiens ubiquitin-conjugating e... 29 9.9
AL034423-7|CAB76864.1| 270|Homo sapiens ubiquitin-conjugating e... 29 9.9
AL034423-6|CAI19384.1| 195|Homo sapiens ubiquitin-conjugating e... 29 9.9
AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK023028-1|BAB14364.1| 270|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF155120-1|AAF08702.1| 267|Homo sapiens ubiquitin-conjugating e... 29 9.9
AB044550-1|BAB18652.1| 270|Homo sapiens ubiquitin-conjyugating ... 29 9.9
>BC005270-1|AAH05270.1| 175|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q
reductas protein.
Length = 175
Score = 135 bits (326), Expect = 1e-31
Identities = 58/106 (54%), Positives = 76/106 (71%)
Frame = +1
Query: 244 ARHQKALDSTIVVPTKADLSPILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFD 423
A+ Q I V K D++ + GVPEEHIKTR+VRI+ PA+N MQSG NN W+MEFD
Sbjct: 43 AQDQTQDTQLITVDEKLDITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFD 102
Query: 424 TRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWYID 561
TR+RWENPLMGW S+ DPLSN+ + F + ++A+ EKNGW + I+
Sbjct: 103 TRERWENPLMGWASTADPLSNMVLTFSTKEDAVSFAEKNGWSYDIE 148
>AF020351-1|AAB87865.1| 175|Homo sapiens NADH:ubiquinone
oxidoreductase 18 kDa IP subunit protein.
Length = 175
Score = 135 bits (326), Expect = 1e-31
Identities = 58/106 (54%), Positives = 76/106 (71%)
Frame = +1
Query: 244 ARHQKALDSTIVVPTKADLSPILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFD 423
A+ Q I V K D++ + GVPEEHIKTR+VRI+ PA+N MQSG NN W+MEFD
Sbjct: 43 AQDQTQDTQLITVDEKLDITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFD 102
Query: 424 TRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWYID 561
TR+RWENPLMGW S+ DPLSN+ + F + ++A+ EKNGW + I+
Sbjct: 103 TRERWENPLMGWASTADPLSNMVLTFSTKEDAVSFAEKNGWSYDIE 148
>DQ100870-1|AAZ08876.1| 113|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 113
Score = 31.1 bits (67), Expect = 3.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 502 RSPDEAIEHCEKNGWMWYIDV 564
R+ D A+ +C + GW WY D+
Sbjct: 85 RAGDTAVYYCARGGWYWYFDL 105
>AB067079-1|BAC02117.1| 118|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 118
Score = 29.9 bits (64), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 502 RSPDEAIEHCEKNGWMWYIDV 564
R+ D A+ +C K W WY D+
Sbjct: 87 RAEDTAVYYCAKETWFWYFDL 107
>DQ454480-1|ABE66564.1| 90|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 90
Score = 29.5 bits (63), Expect = 9.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 502 RSPDEAIEHCEKNGWMWYIDV 564
R+ D A+ +C K W WY D+
Sbjct: 60 RAEDTAVYYCAKKSWGWYFDL 80
>BC142966-1|AAI42967.1| 270|Homo sapiens transmembrane protein 189
protein.
Length = 270
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 388 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWY 555
TN IH W + RW L W P + +I SP E C GW+ Y
Sbjct: 182 TNQIHKWSHTYFGLPRWVTLLQDWHVI-LPRKHHRIHHVSPHETY-FCITTGWLNY 235
>BC112278-1|AAI12279.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPL----MGWTSSG 471
P+LG P H++T + +Y + + N I + F +R E+PL MGW S
Sbjct: 356 PVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR-ESPLIVNTMGWVSDQ 414
Query: 472 DPLSNVK-IQFRSPDEAIE 525
L + I+ SP ++
Sbjct: 415 GLLLLIDLIRLLSPSHVVQ 433
>BC110849-1|AAI10850.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPL----MGWTSSG 471
P+LG P H++T + +Y + + N I + F +R E+PL MGW S
Sbjct: 356 PVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR-ESPLIVNTMGWVSDQ 414
Query: 472 DPLSNVK-IQFRSPDEAIE 525
L + I+ SP ++
Sbjct: 415 GLLLLIDLIRLLSPSHVVQ 433
>BC105095-1|AAI05096.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPL----MGWTSSG 471
P+LG P H++T + +Y + + N I + F +R E+PL MGW S
Sbjct: 356 PVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR-ESPLIVNTMGWVSDQ 414
Query: 472 DPLSNVK-IQFRSPDEAIE 525
L + I+ SP ++
Sbjct: 415 GLLLLIDLIRLLSPSHVVQ 433
>BC094836-1|AAH94836.1| 525|Homo sapiens NOL9 protein protein.
Length = 525
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPL----MGWTSSG 471
P+LG P H++T + +Y + + N I + F +R E+PL MGW S
Sbjct: 179 PVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR-ESPLIVNTMGWVSDQ 237
Query: 472 DPLSNVK-IQFRSPDEAIE 525
L + I+ SP ++
Sbjct: 238 GLLLLIDLIRLLSPSHVVQ 256
>BC063639-1|AAH63639.1| 414|Homo sapiens NOL9 protein protein.
Length = 414
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPL----MGWTSSG 471
P+LG P H++T + +Y + + N I + F +R E+PL MGW S
Sbjct: 68 PVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR-ESPLIVNTMGWVSDQ 126
Query: 472 DPLSNVK-IQFRSPDEAIE 525
L + I+ SP ++
Sbjct: 127 GLLLLIDLIRLLSPSHVVQ 145
>BC009257-1|AAH09257.2| 430|Homo sapiens NOL9 protein protein.
Length = 430
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPL----MGWTSSG 471
P+LG P H++T + +Y + + N I + F +R E+PL MGW S
Sbjct: 84 PVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR-ESPLIVNTMGWVSDQ 142
Query: 472 DPLSNVK-IQFRSPDEAIE 525
L + I+ SP ++
Sbjct: 143 GLLLLIDLIRLLSPSHVVQ 161
>AL591866-4|CAI16071.1| 702|Homo sapiens novel protein protein.
Length = 702
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PILGVPEEHIKTRRVRIYQPAKNAMQSGTNNIHHWEMEFDTRQRWENPL----MGWTSSG 471
P+LG P H++T + +Y + + N I + F +R E+PL MGW S
Sbjct: 356 PVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR-ESPLIVNTMGWVSDQ 414
Query: 472 DPLSNVK-IQFRSPDEAIE 525
L + I+ SP ++
Sbjct: 415 GLLLLIDLIRLLSPSHVVQ 433
>AL034423-8|CAI19385.1| 267|Homo sapiens ubiquitin-conjugating
enzyme E2 variant 1 protein.
Length = 267
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 388 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWY 555
TN IH W + RW L W P + +I SP E C GW+ Y
Sbjct: 179 TNQIHKWSHTYFGLPRWVTLLQDWHVI-LPRKHHRIHHVSPHETY-FCITTGWLNY 232
>AL034423-7|CAB76864.1| 270|Homo sapiens ubiquitin-conjugating
enzyme E2 variant 1 protein.
Length = 270
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 388 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWY 555
TN IH W + RW L W P + +I SP E C GW+ Y
Sbjct: 182 TNQIHKWSHTYFGLPRWVTLLQDWHVI-LPRKHHRIHHVSPHETY-FCITTGWLNY 235
>AL034423-6|CAI19384.1| 195|Homo sapiens ubiquitin-conjugating
enzyme E2 variant 1 protein.
Length = 195
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 388 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWY 555
TN IH W + RW L W P + +I SP E C GW+ Y
Sbjct: 107 TNQIHKWSHTYFGLPRWVTLLQDWHVI-LPRKHHRIHHVSPHETY-FCITTGWLNY 160
>AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens
cDNA FLJ45445 fis, clone BRSSN2013696. ).
Length = 259
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 433 RWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWM 549
RW P GW S P + V ++ SP A + K W+
Sbjct: 5 RWAPPRQGWASRRLPQAQVVLKSGSPGPASQQVSKLFWL 43
>AK023028-1|BAB14364.1| 270|Homo sapiens protein ( Homo sapiens
cDNA FLJ12966 fis, clone NT2RP2005784, highly similar to
Homo sapiens ubiquitin-conjugating enzyme variant Kua
(UBE2V) ).
Length = 270
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 388 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWY 555
TN IH W + RW L W P + +I SP E C GW+ Y
Sbjct: 182 TNQIHKWSHTYFGLPRWVTLLQDWHVI-LPRKHHRIHHVSPHETY-FCITTGWLNY 235
>AF155120-1|AAF08702.1| 267|Homo sapiens ubiquitin-conjugating
enzyme variant Kua protein.
Length = 267
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 388 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWY 555
TN IH W + RW L W P + +I SP E C GW+ Y
Sbjct: 179 TNQIHKWSHTYFGLPRWVTLLQDWHVI-LPRKHHRIHHVSPHETY-FCITTGWLNY 232
>AB044550-1|BAB18652.1| 270|Homo sapiens ubiquitin-conjyugating
enzyme E2 protein.
Length = 270
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 388 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWY 555
TN IH W + RW L W P + +I SP E C GW+ Y
Sbjct: 182 TNQIHKWSHTYFGLPRWVTLLQDWHVI-LPRKHHRIHHVSPHETY-FCITTGWLNY 235
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,463,146
Number of Sequences: 237096
Number of extensions: 2236920
Number of successful extensions: 8578
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8578
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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