Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18e18
(559 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid t... 116 7e-26
BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate aminotr... 116 7e-26
S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate aminotran... 114 2e-25
BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate aminotr... 114 2e-25
L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate aminotran... 107 3e-23
AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate amin... 36 0.13
AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate a... 36 0.13
AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate amin... 33 0.51
AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate amin... 33 0.51
BC110598-1|AAI10599.1| 232|Homo sapiens potassium channel tetra... 31 3.6
BC019929-1|AAH19929.2| 232|Homo sapiens potassium channel tetra... 31 3.6
AY646650-1|AAT75307.1| 232|Homo sapiens potassium channel tetra... 31 3.6
>U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid
transaminase protein.
Length = 500
Score = 116 bits (278), Expect = 7e-26
Identities = 53/122 (43%), Positives = 79/122 (64%)
Frame = +3
Query: 192 SIKMLLRTSRSAHVFRGVRAYSVLQHEPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQL 371
S ++L+ SR H+ + V + + D P ++T +PGP+SQ+L+K+LN +Q A AV
Sbjct: 17 SYRLLVPGSR--HISQAAAKVDV-EFDYDGPLMKTEVPGPRSQELMKQLNIIQNAEAVHF 73
Query: 372 FADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGV 551
F +Y++S GNY D DGN LD ++QISS+P+GY+HP LL + N +NRPALG+
Sbjct: 74 FCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGI 133
Query: 552 FP 557
P
Sbjct: 134 LP 135
>BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 116 bits (278), Expect = 7e-26
Identities = 53/122 (43%), Positives = 79/122 (64%)
Frame = +3
Query: 192 SIKMLLRTSRSAHVFRGVRAYSVLQHEPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQL 371
S ++L+ SR H+ + V + + D P ++T +PGP+SQ+L+K+LN +Q A AV
Sbjct: 17 SYRLLVPGSR--HISQAAAKVDV-EFDYDGPLMKTEVPGPRSQELMKQLNIIQNAEAVHF 73
Query: 372 FADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGV 551
F +Y++S GNY D DGN LD ++QISS+P+GY+HP LL + N +NRPALG+
Sbjct: 74 FCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGI 133
Query: 552 FP 557
P
Sbjct: 134 LP 135
>S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 450
Score = 114 bits (275), Expect = 2e-25
Identities = 47/99 (47%), Positives = 69/99 (69%)
Frame = +3
Query: 261 LQHEPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDA 440
++ + D P ++T +PGP+SQ+L+K+LN +Q A AV F +Y++S GNY D DGN LD
Sbjct: 2 VEFDYDGPLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDL 61
Query: 441 FTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGVFP 557
++QISS+P+GY+HP LL + N +NRPALG+ P
Sbjct: 62 YSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILP 100
>BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 114 bits (274), Expect = 2e-25
Identities = 52/122 (42%), Positives = 79/122 (64%)
Frame = +3
Query: 192 SIKMLLRTSRSAHVFRGVRAYSVLQHEPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQL 371
S ++L+ SR H+ + V + + D P ++T +PGP+S++L+K+LN +Q A AV
Sbjct: 17 SYRLLVPGSR--HISQAAAKVDV-EFDYDGPLMKTEVPGPRSRELMKQLNIIQNAEAVHF 73
Query: 372 FADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGV 551
F +Y++S GNY D DGN LD ++QISS+P+GY+HP LL + N +NRPALG+
Sbjct: 74 FCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGI 133
Query: 552 FP 557
P
Sbjct: 134 LP 135
>L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 107 bits (257), Expect = 3e-23
Identities = 47/112 (41%), Positives = 71/112 (63%)
Frame = +3
Query: 222 SAHVFRGVRAYSVLQHEPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGN 401
S H+ + V + + D P ++T +PGP+SQ+L+K+LN +Q A AV F +Y++S GN
Sbjct: 25 SRHISQAAAKVDV-EFDYDGPLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGN 83
Query: 402 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGVFP 557
Y D DGN LD ++QISS+P+GY+ P L+ + N +NRPAL + P
Sbjct: 84 YLVDVDGNRMLDLYSQISSVPIGYSDPALVKLIQQPQNASMFVNRPALEILP 135
>AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 502
Score = 35.5 bits (78), Expect = 0.13
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +3
Query: 402 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 509
+ FDA+GN +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 83 WLFDAEGNRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 118
>AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate
aminotransferase protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.13
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +3
Query: 402 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 509
+ FDA+GN +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 95 WLFDAEGNRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 130
>AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.51
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +3
Query: 402 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 509
+ FDA+G+ +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 95 WLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 130
>AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.51
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +3
Query: 402 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 509
+ FDA+G+ +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 95 WLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 130
>BC110598-1|AAI10599.1| 232|Homo sapiens potassium channel
tetramerisation domain containing 11 protein.
Length = 232
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 396 GNYFFDADGNAF--LDAFTQIS--SLPVGYNHPELLSAFEDQHNLKSLIN 533
G+YF D DG AF + F ++ LP GY LL A D + ++ L++
Sbjct: 22 GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
>BC019929-1|AAH19929.2| 232|Homo sapiens potassium channel
tetramerisation domain containing 11 protein.
Length = 232
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 396 GNYFFDADGNAF--LDAFTQIS--SLPVGYNHPELLSAFEDQHNLKSLIN 533
G+YF D DG AF + F ++ LP GY LL A D + ++ L++
Sbjct: 22 GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
>AY646650-1|AAT75307.1| 232|Homo sapiens potassium channel
tetramerization domain containing 11 protein.
Length = 232
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 396 GNYFFDADGNAF--LDAFTQIS--SLPVGYNHPELLSAFEDQHNLKSLIN 533
G+YF D DG AF + F ++ LP GY LL A D + ++ L++
Sbjct: 22 GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,045,290
Number of Sequences: 237096
Number of extensions: 1365956
Number of successful extensions: 2626
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2626
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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