Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18e09
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52479-1|CAA36718.1| 672|Homo sapiens protein ( Human PKC alpha... 32 1.4
X07109-1|CAA30130.1| 673|Homo sapiens protein ( Human mRNA for ... 32 1.4
X06318-1|CAA29634.1| 671|Homo sapiens protein ( Human mRNA for ... 32 1.4
M13975-1|AAA60095.1| 673|Homo sapiens protein kinase C beta-II ... 32 1.4
BC109274-1|AAI09275.1| 672|Homo sapiens protein kinase C, alpha... 32 1.4
BC109273-1|AAI09274.1| 672|Homo sapiens protein kinase C, alpha... 32 1.4
BC036472-1|AAH36472.1| 673|Homo sapiens protein kinase C, beta ... 32 1.4
AY633609-1|AAV33302.1| 672|Homo sapiens aging-associated gene 6... 32 1.4
AC002299-2|AAB97934.1| 496|Homo sapiens Protein kinase C beta (... 32 1.4
AC002299-1|AAB97933.1| 494|Homo sapiens Protein kinase C beta (... 32 1.4
AB209475-1|BAD92712.1| 461|Homo sapiens protein kinase C, alpha... 32 1.4
X54637-1|CAA38449.1| 1187|Homo sapiens protein ( Human tyk2 mRNA... 31 2.5
AY549314-1|AAS37680.1| 1187|Homo sapiens tyrosine kinase 2 protein. 31 2.5
Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of... 31 3.3
S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein. 31 3.3
D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein. 31 3.3
BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural mainten... 31 3.3
BC014243-1|AAH14243.1| 1187|Homo sapiens tyrosine kinase 2 protein. 31 3.3
AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance ... 31 3.3
>X52479-1|CAA36718.1| 672|Homo sapiens protein ( Human PKC alpha
mRNA for protein kinase C alpha. ).
Length = 672
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF H + +++R D + ++ + I+ CK+ + D + T TFC
Sbjct: 451 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFC 499
>X07109-1|CAA30130.1| 673|Homo sapiens protein ( Human mRNA for
protein kinase C (PKC) type beta II. ).
Length = 673
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF K +++R D + ++ + I+ CK+ I+D + T TFC
Sbjct: 454 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC 502
>X06318-1|CAA29634.1| 671|Homo sapiens protein ( Human mRNA for
protein kinase C (PKC) type beta I. ).
Length = 671
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF K +++R D + ++ + I+ CK+ I+D + T TFC
Sbjct: 454 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC 502
>M13975-1|AAA60095.1| 673|Homo sapiens protein kinase C beta-II
type protein.
Length = 673
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF K +++R D + ++ + I+ CK+ I+D + T TFC
Sbjct: 454 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC 502
>BC109274-1|AAI09275.1| 672|Homo sapiens protein kinase C, alpha
protein.
Length = 672
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF H + +++R D + ++ + I+ CK+ + D + T TFC
Sbjct: 451 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFC 499
>BC109273-1|AAI09274.1| 672|Homo sapiens protein kinase C, alpha
protein.
Length = 672
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF H + +++R D + ++ + I+ CK+ + D + T TFC
Sbjct: 451 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFC 499
>BC036472-1|AAH36472.1| 673|Homo sapiens protein kinase C, beta 1
protein.
Length = 673
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF K +++R D + ++ + I+ CK+ I+D + T TFC
Sbjct: 454 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC 502
>AY633609-1|AAV33302.1| 672|Homo sapiens aging-associated gene 6
protein protein.
Length = 672
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF H + +++R D + ++ + I+ CK+ + D + T TFC
Sbjct: 451 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFC 499
>AC002299-2|AAB97934.1| 496|Homo sapiens Protein kinase C beta (5'
partial) splice form_ protein.
Length = 496
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF K +++R D + ++ + I+ CK+ I+D + T TFC
Sbjct: 277 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC 325
>AC002299-1|AAB97933.1| 494|Homo sapiens Protein kinase C beta (5'
partial) splice form_1 protein.
Length = 494
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF K +++R D + ++ + I+ CK+ I+D + T TFC
Sbjct: 277 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC 325
>AB209475-1|BAD92712.1| 461|Homo sapiens protein kinase C, alpha
variant protein.
Length = 461
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 454 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 311
LFF H + +++R D + ++ + I+ CK+ + D + T TFC
Sbjct: 362 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFC 410
>X54637-1|CAA38449.1| 1187|Homo sapiens protein ( Human tyk2 mRNA for
non-receptor protein tyrosine kinase. ).
Length = 1187
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 266 GRKEMSLFVKQIIHNAERISI--YSVEDIFAREALAYRELCPVFEDLQIEAGIPENERFK 439
G ++ LF +QI + Y D+ AR L + D + +PE +
Sbjct: 996 GLAQLLLFAQQICEGMAYLHAHDYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 1055
Query: 440 MVKKQECTKDVIILKNVCKKGYKTYYRMDVVS 535
V+ ++ V C K YK YY DV S
Sbjct: 1056 RVR-EDGDSPVFWYAPECLKEYKFYYASDVWS 1086
>AY549314-1|AAS37680.1| 1187|Homo sapiens tyrosine kinase 2 protein.
Length = 1187
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 266 GRKEMSLFVKQIIHNAERISI--YSVEDIFAREALAYRELCPVFEDLQIEAGIPENERFK 439
G ++ LF +QI + Y D+ AR L + D + +PE +
Sbjct: 996 GLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 1055
Query: 440 MVKKQECTKDVIILKNVCKKGYKTYYRMDVVS 535
V+ ++ V C K YK YY DV S
Sbjct: 1056 RVR-EDGDSPVFWYAPECLKEYKFYYASDVWS 1086
>Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 31.1 bits (67), Expect = 3.3
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 221 MGDLYVVDVRGTTKD-GRKEMSLFVKQIIHNAERISIYSVEDIFAREALA---YRELCPV 388
M D+ + +GT D ++E S + + ++RIS I+AREAL Y +LC
Sbjct: 935 MQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRIS-----SIYAREALIEIDYGDLCED 989
Query: 389 FEDLQIEAGIPENERFKMVKKQECTKDVIILKNVCKKGYKTYYRMDVVSPKFAE 550
+D Q E I + +Q+ + +L+ + K +++ V KF E
Sbjct: 990 LKDAQAEEEIKQEMN---TLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein.
Length = 1233
Score = 31.1 bits (67), Expect = 3.3
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 221 MGDLYVVDVRGTTKD-GRKEMSLFVKQIIHNAERISIYSVEDIFAREALA---YRELCPV 388
M D+ + +GT D ++E S + + ++RIS I+AREAL Y +LC
Sbjct: 935 MQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRIS-----SIYAREALIEIDYGDLCED 989
Query: 389 FEDLQIEAGIPENERFKMVKKQECTKDVIILKNVCKKGYKTYYRMDVVSPKFAE 550
+D Q E I + +Q+ + +L+ + K +++ V KF E
Sbjct: 990 LKDAQAEEEIKQEMN---TLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein.
Length = 1233
Score = 31.1 bits (67), Expect = 3.3
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 221 MGDLYVVDVRGTTKD-GRKEMSLFVKQIIHNAERISIYSVEDIFAREALA---YRELCPV 388
M D+ + +GT D ++E S + + ++RIS I+AREAL Y +LC
Sbjct: 935 MQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRIS-----SIYAREALIEIDYGDLCED 989
Query: 389 FEDLQIEAGIPENERFKMVKKQECTKDVIILKNVCKKGYKTYYRMDVVSPKFAE 550
+D Q E I + +Q+ + +L+ + K +++ V KF E
Sbjct: 990 LKDAQAEEEIKQEMN---TLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural maintenance
of chromosomes 1-like 1 protein.
Length = 1233
Score = 31.1 bits (67), Expect = 3.3
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 221 MGDLYVVDVRGTTKD-GRKEMSLFVKQIIHNAERISIYSVEDIFAREALA---YRELCPV 388
M D+ + +GT D ++E S + + ++RIS I+AREAL Y +LC
Sbjct: 935 MQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRIS-----SIYAREALIEIDYGDLCED 989
Query: 389 FEDLQIEAGIPENERFKMVKKQECTKDVIILKNVCKKGYKTYYRMDVVSPKFAE 550
+D Q E I + +Q+ + +L+ + K +++ V KF E
Sbjct: 990 LKDAQAEEEIKQEMN---TLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>BC014243-1|AAH14243.1| 1187|Homo sapiens tyrosine kinase 2 protein.
Length = 1187
Score = 31.1 bits (67), Expect = 3.3
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 266 GRKEMSLFVKQIIHNAERISI--YSVEDIFAREALAYRELCPVFEDLQIEAGIPENERFK 439
G ++ LF +QI + Y D+ AR L + D + +PE +
Sbjct: 996 GLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 1055
Query: 440 MVKKQECTKDVIILKNVCKKGYKTYYRMDVVS 535
V+ ++ V C K YK YY DV S
Sbjct: 1056 RVR-EDGDSPVFWYAPECLKEYKFYYASDVWS 1086
>AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 31.1 bits (67), Expect = 3.3
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 221 MGDLYVVDVRGTTKD-GRKEMSLFVKQIIHNAERISIYSVEDIFAREALA---YRELCPV 388
M D+ + +GT D ++E S + + ++RIS I+AREAL Y +LC
Sbjct: 935 MQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRIS-----SIYAREALIEIDYGDLCED 989
Query: 389 FEDLQIEAGIPENERFKMVKKQECTKDVIILKNVCKKGYKTYYRMDVVSPKFAE 550
+D Q E I + +Q+ + +L+ + K +++ V KF E
Sbjct: 990 LKDAQAEEEIKQEMN---TLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,283,500
Number of Sequences: 237096
Number of extensions: 1642389
Number of successful extensions: 4031
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4029
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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