Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18e07
         (305 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR848842-1|CAM45845.1|  101|Homo sapiens calpain 8 protein.            31   0.87 
BC018437-1|AAH18437.1|  250|Homo sapiens SEC22 vesicle trafficki...    27   8.1  
AY869727-1|AAW65947.1|  246|Homo sapiens immunoglobulin gamma he...    27   8.1  
AK122591-1|BAC56932.1|  600|Homo sapiens FLJ00417 protein protein.     27   8.1  
AK122589-1|BAC56930.1| 1129|Homo sapiens FLJ00414 protein protein.     27   8.1  
AK074149-1|BAB84975.1|  656|Homo sapiens FLJ00222 protein protein.     27   8.1  
AF039568-1|AAD02171.1|  250|Homo sapiens vesicle trafficking pro...    27   8.1  

>CR848842-1|CAM45845.1|  101|Homo sapiens calpain 8 protein.
          Length = 101

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 130 TCAEWISIVARETRDDFYKPAKNSAY*HWTSLPSVLTATEMWP 258
           TC E IS++  ET+D    P  +  +  W +   +L     WP
Sbjct: 32  TCREMISLLDEETQDTMQVPDSSETF--WNTEADILDTVRRWP 72


>BC018437-1|AAH18437.1|  250|Homo sapiens SEC22 vesicle trafficking
           protein homolog C (S. cerevisiae) protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 237 EHGRQRCPVSISGVLSWLIKVISCFSGDNRDPFCTRD 127
           EH  Q     I  +L++L+  ++C   D R  FC  D
Sbjct: 211 EHSLQVAHEEIGNILAFLVPFVACIFQDPRSWFCWLD 247


>AY869727-1|AAW65947.1|  246|Homo sapiens immunoglobulin gamma heavy
           chain 3 protein.
          Length = 246

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 188 QLRTPLIDTGHLCLPC 235
           +L+TPL DT H C PC
Sbjct: 13  ELKTPLGDTTHTCPPC 28


>AK122591-1|BAC56932.1|  600|Homo sapiens FLJ00417 protein protein.
          Length = 600

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 187 PAKNSAY*HWTSLPSVLTATEMWPKHCNKNTTL 285
           P   +A   WT  P VL    ++P HC + T L
Sbjct: 561 PGSPAAASAWTVSPRVLVLVALYPWHCLRGTLL 593


>AK122589-1|BAC56930.1| 1129|Homo sapiens FLJ00414 protein protein.
          Length = 1129

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 187  PAKNSAY*HWTSLPSVLTATEMWPKHCNKNTTL 285
            P   +A   WT  P VL    ++P HC + T L
Sbjct: 1090 PGSPAAASAWTVSPRVLVLVALYPWHCLRGTLL 1122


>AK074149-1|BAB84975.1|  656|Homo sapiens FLJ00222 protein protein.
          Length = 656

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 187 PAKNSAY*HWTSLPSVLTATEMWPKHCNKNTTL 285
           P   +A   WT  P VL    ++P HC + T L
Sbjct: 617 PGSPAAASAWTVSPRVLVLVALYPWHCLRGTLL 649


>AF039568-1|AAD02171.1|  250|Homo sapiens vesicle trafficking
           protein protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 237 EHGRQRCPVSISGVLSWLIKVISCFSGDNRDPFCTRD 127
           EH  Q     I  +L++L+  ++C   D R  FC  D
Sbjct: 211 EHSLQVAHEEIGNILAFLVPFVACIFQDPRSWFCWLD 247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,251,269
Number of Sequences: 237096
Number of extensions: 807763
Number of successful extensions: 1564
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)