Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18e07
(305 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 27 3.4
U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft ... 27 4.5
BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p pro... 27 4.5
BT001281-1|AAN71037.1| 397|Drosophila melanogaster AT07872p pro... 27 4.5
AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD2272... 27 4.5
AE014297-3231|AAF56061.2| 397|Drosophila melanogaster CG31139-P... 27 4.5
AE014297-2909|AAF55835.1| 229|Drosophila melanogaster CG12278-P... 27 4.5
AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA... 27 4.5
AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB... 27 4.5
BT016070-1|AAV36955.1| 940|Drosophila melanogaster LP07754p pro... 26 7.9
AE014297-3032|AAN13881.1| 940|Drosophila melanogaster CG31198-P... 26 7.9
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 48 VCIQKLQK*GPKSNLTAGVSYFRFPSNHVCRMDLDCR 158
+C+Q + + KSN + F+F SN++C +L+CR
Sbjct: 2593 LCLQGVCQGTCKSN--SSCPQFQFCSNNICTKELECR 2627
>U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft
protein protein.
Length = 1106
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 206 IDTGHLC-LPCSRLLKCGRN 262
ID H C LPC+R L CG++
Sbjct: 717 IDIDHDCPLPCNRTLSCGKH 736
>BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p
protein.
Length = 246
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 23 CQPVSQYRSVYSKVAKIRPEKQFN 94
C V QYR ++ K K +P+K F+
Sbjct: 103 CSVVDQYRGMWKKPKKPKPKKHFH 126
>BT001281-1|AAN71037.1| 397|Drosophila melanogaster AT07872p
protein.
Length = 397
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 143 GSRLSPEKQEMTFISQLRTPLIDTGHLCL 229
GSR SPE+ + +SQ R L+D + L
Sbjct: 219 GSRSSPERDSLVRLSQRRPDLVDAQYTIL 247
>AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD22726
protein.
Length = 1106
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 206 IDTGHLC-LPCSRLLKCGRN 262
ID H C LPC+R L CG++
Sbjct: 717 IDIDHDCPLPCNRTLSCGKH 736
>AE014297-3231|AAF56061.2| 397|Drosophila melanogaster CG31139-PA
protein.
Length = 397
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 143 GSRLSPEKQEMTFISQLRTPLIDTGHLCL 229
GSR SPE+ + +SQ R L+D + L
Sbjct: 219 GSRSSPERDSLVRLSQRRPDLVDAQYTIL 247
>AE014297-2909|AAF55835.1| 229|Drosophila melanogaster CG12278-PA
protein.
Length = 229
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 23 CQPVSQYRSVYSKVAKIRPEKQFN 94
C V QYR ++ K K +P+K F+
Sbjct: 86 CSVVDQYRGMWKKPKKPKPKKHFH 109
>AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA,
isoform A protein.
Length = 1099
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 206 IDTGHLC-LPCSRLLKCGRN 262
ID H C LPC+R L CG++
Sbjct: 710 IDIDHDCPLPCNRTLSCGKH 729
>AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB,
isoform B protein.
Length = 1106
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 206 IDTGHLC-LPCSRLLKCGRN 262
ID H C LPC+R L CG++
Sbjct: 717 IDIDHDCPLPCNRTLSCGKH 736
>BT016070-1|AAV36955.1| 940|Drosophila melanogaster LP07754p
protein.
Length = 940
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 142 WISIVARETRDDFYKPAKNSAY 207
WI +++ +T +D Y +KN Y
Sbjct: 76 WIEVISNQTTNDIYLHSKNLTY 97
>AE014297-3032|AAN13881.1| 940|Drosophila melanogaster CG31198-PA
protein.
Length = 940
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 142 WISIVARETRDDFYKPAKNSAY 207
WI +++ +T +D Y +KN Y
Sbjct: 76 WIEVISNQTTNDIYLHSKNLTY 97
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,278,076
Number of Sequences: 53049
Number of extensions: 236932
Number of successful extensions: 486
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -