Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18e06
         (342 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1999|AAF48342.2|  261|Drosophila melanogaster CG13402-P...    28   2.8  
M23629-1|AAA56800.1|  350|Drosophila melanogaster developmental ...    27   6.4  
BT022142-1|AAY51537.1|  350|Drosophila melanogaster IP01518p pro...    27   6.4  
AE014297-4017|AAN14093.1|  350|Drosophila melanogaster CG6348-PB...    27   6.4  
AE014297-4016|AAF56635.1|  350|Drosophila melanogaster CG6348-PA...    27   6.4  

>AE014298-1999|AAF48342.2|  261|Drosophila melanogaster CG13402-PA
           protein.
          Length = 261

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 76  KLVFTMPKVVKSAGREIILKAKDFVKQN 159
           K+V TMP+V  +AG    + + DFV+++
Sbjct: 65  KVVLTMPRVQSTAGNSFFVVSGDFVRKS 92


>M23629-1|AAA56800.1|  350|Drosophila melanogaster developmental
           protein protein.
          Length = 350

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 299 HHHHQQPTVVHSKM 258
           HHHH  P +VH K+
Sbjct: 127 HHHHHPPQLVHQKL 140


>BT022142-1|AAY51537.1|  350|Drosophila melanogaster IP01518p
           protein.
          Length = 350

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 299 HHHHQQPTVVHSKM 258
           HHHH  P +VH K+
Sbjct: 127 HHHHHPPQLVHQKL 140


>AE014297-4017|AAN14093.1|  350|Drosophila melanogaster CG6348-PB,
           isoform B protein.
          Length = 350

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 299 HHHHQQPTVVHSKM 258
           HHHH  P +VH K+
Sbjct: 127 HHHHHPPQLVHQKL 140


>AE014297-4016|AAF56635.1|  350|Drosophila melanogaster CG6348-PA,
           isoform A protein.
          Length = 350

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 299 HHHHQQPTVVHSKM 258
           HHHH  P +VH K+
Sbjct: 127 HHHHHPPQLVHQKL 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,144,435
Number of Sequences: 53049
Number of extensions: 237607
Number of successful extensions: 1028
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)