Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18d14
         (588 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125274-1|AAI25275.1|  578|Homo sapiens ANKRD41 protein protein.      33   0.99 
AK092706-1|BAC03953.1|  575|Homo sapiens protein ( Homo sapiens ...    33   0.99 
BC067293-1|AAH67293.1|  580|Homo sapiens F-box protein 24 protein.     32   1.3  
AC069281-1|AAP21863.1|  580|Homo sapiens unknown protein.              32   1.3  
AF174604-1|AAF04525.1|  318|Homo sapiens F-box protein Fbx24 pro...    32   1.7  
AF053356-11|AAC78801.1|  318|Homo sapiens ORF4 protein.                32   1.7  
AC069281-2|AAP21862.1|  318|Homo sapiens unknown protein.              32   1.7  

>BC125274-1|AAI25275.1|  578|Homo sapiens ANKRD41 protein protein.
          Length = 578

 Score = 32.7 bits (71), Expect = 0.99
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 327 NGCSLDIYNHYSVS-EASFVTSVEESCRVDQCTQTPPSGKSRPRTLQ 464
           +G S     H+  S +ASFVT+VE S   D  + TPP   S P T Q
Sbjct: 192 HGSSASPPGHWDYSSDASFVTAVEVSGAEDPASDTPPWAGSLPPTRQ 238


>AK092706-1|BAC03953.1|  575|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35387 fis, clone SKNMC1000123, weakly similar to
           CYCLIN-DEPENDENT KINASE 4 INHIBITOR A. ).
          Length = 575

 Score = 32.7 bits (71), Expect = 0.99
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 327 NGCSLDIYNHYSVS-EASFVTSVEESCRVDQCTQTPPSGKSRPRTLQ 464
           +G S     H+  S +ASFVT+VE S   D  + TPP   S P T Q
Sbjct: 189 HGSSASPPGHWDYSSDASFVTAVEVSGAEDPASDTPPWAGSLPPTRQ 235


>BC067293-1|AAH67293.1|  580|Homo sapiens F-box protein 24 protein.
          Length = 580

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 458 LTKVSHF*PHLREICVQETQARALPVNDK 544
           L KVSH+ PHLR  C+   Q+  L V D+
Sbjct: 291 LRKVSHYLPHLRVACMTSNQSSTLYVTDQ 319


>AC069281-1|AAP21863.1|  580|Homo sapiens unknown protein.
          Length = 580

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 458 LTKVSHF*PHLREICVQETQARALPVNDK 544
           L KVSH+ PHLR  C+   Q+  L V D+
Sbjct: 291 LRKVSHYLPHLRVACMTSNQSSTLYVTDQ 319


>AF174604-1|AAF04525.1|  318|Homo sapiens F-box protein Fbx24
           protein.
          Length = 318

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 458 LTKVSHF*PHLREICVQETQARALPVND 541
           L KVSH+ PHLR  C+   Q+  L V D
Sbjct: 277 LRKVSHYLPHLRVACMTSNQSSTLYVTD 304


>AF053356-11|AAC78801.1|  318|Homo sapiens ORF4 protein.
          Length = 318

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 458 LTKVSHF*PHLREICVQETQARALPVND 541
           L KVSH+ PHLR  C+   Q+  L V D
Sbjct: 277 LRKVSHYLPHLRVACMTSNQSSTLYVTD 304


>AC069281-2|AAP21862.1|  318|Homo sapiens unknown protein.
          Length = 318

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 458 LTKVSHF*PHLREICVQETQARALPVND 541
           L KVSH+ PHLR  C+   Q+  L V D
Sbjct: 277 LRKVSHYLPHLRVACMTSNQSSTLYVTD 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,530,318
Number of Sequences: 237096
Number of extensions: 1541879
Number of successful extensions: 3201
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3197
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)