Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18d14
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   3.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   3.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   3.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   3.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.0  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 429 PPSGKSRPRTLQRYHTSDH 485
           PP  +++ +    YH SDH
Sbjct: 250 PPKPQTKTKPTSPYHVSDH 268


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 104 NINVFEYSLQIPINVHFSRISQIVDFFYILDN 199
           N  +++Y     I    SRIS  +D  YIL+N
Sbjct: 315 NFPIYKYKYIREIMNKESRISAAIDSGYILNN 346


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 104 NINVFEYSLQIPINVHFSRISQIVDFFYILDN 199
           N  +++Y     I    SRIS  +D  YIL+N
Sbjct: 315 NFPIYKYKYIREIMNKESRISAAIDSGYILNN 346


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 532 W*CSCLCFLYADL 494
           W   C+CF+YA L
Sbjct: 366 WDGVCMCFIYASL 378


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 532 W*CSCLCFLYADL 494
           W   C+CF+YA L
Sbjct: 335 WDGVCMCFIYASL 347


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 532 W*CSCLCFLYADL 494
           W   C+CF+YA L
Sbjct: 386 WDGVCMCFIYASL 398


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 532 W*CSCLCFLYADL 494
           W   C+CF+YA L
Sbjct: 335 WDGVCMCFIYASL 347


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 80  DEKIAYKKKVLFRPTREITSVVLIEL 3
           D  +AYK K+L +PT    S  L+ L
Sbjct: 733 DTVLAYKPKILGKPTISPDSRHLVTL 758


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 230 GIMQPRNLTKHYREYKKNL 174
           G+ Q  NLTKH + ++ +L
Sbjct: 109 GVPQLGNLTKHLQVFRDHL 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,884
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)