Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18d07
(546 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178... 31 0.60
06_01_0642 + 4658771-4659248,4659322-4660208 29 1.8
01_01_0045 - 330630-331274 29 1.8
08_01_0098 - 700443-700660,701112-701268,701586-701678,701763-70... 29 3.2
11_06_0270 + 21803292-21803672 28 4.2
11_06_0268 + 21797538-21797966 28 4.2
11_06_0267 + 21795762-21796190 28 4.2
12_02_0663 + 21653536-21653541,21654027-21654212,21654316-216543... 28 5.6
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848... 28 5.6
07_01_0152 - 1088664-1089092 28 5.6
07_01_0150 - 1084802-1085230 28 5.6
07_01_0145 + 1066127-1066558 28 5.6
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 27 7.4
09_03_0029 + 11724581-11724583,11726413-11726610,11726874-117270... 27 7.4
07_01_0133 + 975321-975749 27 7.4
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82... 27 9.8
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261... 27 9.8
07_01_0147 - 1075626-1075719,1075922-1076346 27 9.8
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719... 27 9.8
>03_05_0226 -
22115285-22115404,22115477-22116661,22117037-22117861,
22118029-22118106,22118370-22118420,22118510-22118581,
22118666-22118667,22119453-22119557,22119668-22119749,
22120178-22120227,22120514-22120567,22121084-22121164,
22121567-22121656,22121884-22121964,22122304-22122544
Length = 1038
Score = 31.1 bits (67), Expect = 0.60
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +2
Query: 233 MDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIAL 412
M+ +EEK PK Q K ++KI KD P ++ N++ + G +
Sbjct: 1 MELEEEKDPPKHQSKIKMNSEEIKKRKIRLGKDQDPEKKEMSGKNIKSIKETGTKGQSKE 60
Query: 413 NDRKQAKNK 439
+K++K++
Sbjct: 61 LQKKESKSR 69
>06_01_0642 + 4658771-4659248,4659322-4660208
Length = 454
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -2
Query: 344 RLAASLCFCLFSVQFSCFYGIY--LCTAPLVLVFPLCDP*EDYSLVIFANLHL*DPSAIL 171
R+A L +V + F G+ TA L V P C P Y L+ A + DP+ L
Sbjct: 201 RMAQRLPRAATAVALNTFPGLDPPTVTAALTAVLPTCLPLGPYHLLATAPANDDDPNGCL 260
Query: 170 FGYDRQKLFAFAYESF 123
DR AY SF
Sbjct: 261 AWLDRHAPRTVAYVSF 276
>01_01_0045 - 330630-331274
Length = 214
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 128 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTE 307
S K+KR S+DH+Q + Q A++L+ + + +K+ K K R+ +K E
Sbjct: 73 SDKKKRKRSEDHHQAATHVKQEQEAQQVAFAADLVAEEETDKETSK-----KNRKKKKHE 127
Query: 308 QKINKSKDLQ 337
+ ++D++
Sbjct: 128 SQQENARDVK 137
>08_01_0098 -
700443-700660,701112-701268,701586-701678,701763-702149,
702755-702829,703486-703609,703693-703832,703904-703993,
704254-704298,704917-705042,705138-705272,705966-706451,
706539-706596,706728-706855,707209-707463
Length = 838
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 80 VRSFFNFIFGINMV-----ENSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHK 244
+R FF+ I G+ + + + K + A D + L I N KLLA + +
Sbjct: 689 IRRFFSDIGGVTAIRLLRDKFTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLAKKVSVARS 748
Query: 245 EEKQAPKEQYTGKFRRNRKT 304
+ + K + G F +++ T
Sbjct: 749 DPSKGKKNREAGSFSKDQAT 768
>11_06_0270 + 21803292-21803672
Length = 126
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL ++V++ + E
Sbjct: 67 TAFVEKGKLKKITGVKTKELMLWLSVVEVYVEE 99
>11_06_0268 + 21797538-21797966
Length = 142
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL ++V++ + E
Sbjct: 83 TAFVEKGKLKKIAGVKTKELMLWLSVVEVYVEE 115
>11_06_0267 + 21795762-21796190
Length = 142
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL ++V++ + E
Sbjct: 83 TAFVEKGKLKKIAGVKTKELMLWLSVVEVYVDE 115
>12_02_0663 +
21653536-21653541,21654027-21654212,21654316-21654393,
21654581-21654694,21654799-21654865,21654954-21655015,
21655123-21655262,21655552-21655678,21655758-21655872,
21656111-21656199,21656593-21656733,21657067-21657192,
21657655-21657714,21658285-21658443
Length = 489
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 200 NWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPD 379
N ++L +S L + E + Q + + R + E +I+ DLQ ++K ETL E +
Sbjct: 402 NQEELQSSRLKQELANELDLVRNQLSAEEARASQLENEIS---DLQQRLQKMETLEKESE 458
Query: 380 ----QADGHEDDIALNDRKQAKNK 439
+ D DD + ++ +K
Sbjct: 459 SLRLEKDAESDDSSSGSNQRPADK 482
>10_05_0042 +
8481227-8481764,8482291-8482418,8483349-8483933,
8484033-8484061,8485221-8485612,8486038-8486454,
8486587-8486668,8487116-8487686
Length = 913
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 143 RTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEE 250
RTA +DH+ RG N + + ++L+DH ++
Sbjct: 624 RTAHNDHDAYCVARGYFNELINRSMIQSILLDHNDD 659
>07_01_0152 - 1088664-1089092
Length = 142
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL ++V++ ++E
Sbjct: 83 TAFVEKGKLKKITGVKTKELLLWLSVVEVYVAE 115
>07_01_0150 - 1084802-1085230
Length = 142
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL ++V++ ++E
Sbjct: 83 TAFVEKGKLKKIAGVKTKELLLWLSVVEVYVTE 115
>07_01_0145 + 1066127-1066558
Length = 143
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL ++V++ ++E
Sbjct: 84 TAFVEKGKLKKIAGVKTKELLLWLSVVEVYVAE 116
>10_08_0911 -
21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 221 SNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHED 400
SN L+ HK+ + PK+ N K S++++PT+ ET E D++ E
Sbjct: 774 SNALLHHKQT-EPPKDPKDHTASTNNSHVSKEGSSRNVKPTLTSEETHTAE-DKSFSFEV 831
Query: 401 DIALNDRKQA 430
LN ++A
Sbjct: 832 GAPLNITEKA 841
>09_03_0029 +
11724581-11724583,11726413-11726610,11726874-11727038,
11727217-11727283,11727645-11727812,11728070-11728194,
11728288-11728446,11728552-11728714,11728795-11728920,
11729000-11729083,11729161-11729528,11729613-11729813,
11729909-11730018,11730113-11730197,11730360-11730488,
11730580-11730667,11730805-11730893,11730968-11731267
Length = 875
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
Frame = -3
Query: 448 LGYFVFSLFPVIKC-----YI-IF----MSVCLVRF*IQSFKFPNGWLQVFAFV 317
L +FV S F +K YI +F + L RF ++ FPNGWL V V
Sbjct: 376 LAFFVASFFSSVKTATVIGYIYVFGSGLLGAFLFRFFVEDRTFPNGWLLVMEIV 429
>07_01_0133 + 975321-975749
Length = 142
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL +IV++ +E
Sbjct: 83 TAFVEKGKLKKITGVKTKELMLWLSIVEVYAAE 115
>10_01_0062 -
818396-818538,819482-819693,819936-820420,820540-820696,
820787-820924,821127-821703,821978-822018,822679-822809
Length = 627
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 8 IAILYSLIFIFTILYLSCNSFVTIVRSFF 94
I +YS++FI I+ L +F+T+ ++F
Sbjct: 470 IYTIYSILFIVFIILLIVTAFITVALTYF 498
>07_03_0762 +
21324550-21325414,21325606-21325746,21325993-21326177,
21326200-21326410,21326526-21326769,21326853-21327003,
21327089-21327439
Length = 715
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 98 FIFGINMVENSHKRKRTASDDHNQTVSLRGLINANWQK 211
F FG+ ++E R+ T S D Q V L L+ +W +
Sbjct: 569 FSFGVLVLEIITGRRNTGSYDSGQDVDLLNLVWEHWTR 606
>07_01_0147 - 1075626-1075719,1075922-1076346
Length = 172
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 120 TIFIPKMKLKKLLTIVTKELQDKYNIVKMNISE 22
T F+ K KLKK+ + TKEL +I+++ +E
Sbjct: 83 TAFVEKGKLKKITGVKTKELMLWLSIIEVYAAE 115
>03_02_0296 +
7191455-7191615,7192031-7192071,7192156-7192741,
7193307-7193444,7193572-7193728,7193848-7194332,
7194867-7195086
Length = 595
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 8 IAILYSLIFIFTILYLSCNSFVTIVRSFF 94
I +YS++FI I+ L +F+T+ ++F
Sbjct: 483 IYTIYSILFIVFIILLIVTAFITVALTYF 511
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,429,661
Number of Sequences: 37544
Number of extensions: 229980
Number of successful extensions: 623
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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