Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18d07
(546 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4... 53 8e-07
AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease ... 53 8e-07
AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease ... 53 8e-07
AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease ... 53 8e-07
AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens ... 53 8e-07
AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein. 53 8e-07
AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein. 53 8e-07
BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein. 40 0.008
AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated e... 40 0.008
AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens ... 40 0.008
BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated e... 36 0.093
BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein. 36 0.093
AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein SB... 36 0.093
X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein. 33 0.65
U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein. 33 0.65
CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein. 33 0.65
BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated g... 33 0.65
BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein. 33 0.65
BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated e... 33 0.65
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 4.6
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 4.6
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 30 4.6
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 4.6
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 4.6
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 30 4.6
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 30 4.6
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 30 4.6
BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag dom... 30 6.1
BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein. 30 6.1
AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein. 30 6.1
>BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 532
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 533 FGDC 544
+G C
Sbjct: 271 YGKC 274
>AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 532
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 533 FGDC 544
+G C
Sbjct: 271 YGKC 274
>AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 374
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 532
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 196 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 255
Query: 533 FGDC 544
+G C
Sbjct: 256 YGKC 259
>AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 189
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 532
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 118 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 177
Query: 533 FGDC 544
+G C
Sbjct: 178 YGKC 181
>AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21840 fis, clone HEP01804. ).
Length = 422
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 532
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 533 FGDC 544
+G C
Sbjct: 271 YGKC 274
>AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein.
Length = 422
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 532
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 533 FGDC 544
+G C
Sbjct: 271 YGKC 274
>AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein.
Length = 422
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 532
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 533 FGDC 544
+G C
Sbjct: 271 YGKC 274
>BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.008
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 6/144 (4%)
Frame = +2
Query: 128 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 292
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 293 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 469
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 470 MVGIGYDGNDHMLARVSLVNKFGD 541
MVG G G+ LAR S+VN GD
Sbjct: 186 MVGTGPKGHVSSLARCSIVNYNGD 209
>AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated
exonuclease gene 20kDa-liker), member 1 (antiporter,
Na+/ protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.008
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 6/144 (4%)
Frame = +2
Query: 128 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 292
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 293 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 469
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 470 MVGIGYDGNDHMLARVSLVNKFGD 541
MVG G G+ LAR S+VN GD
Sbjct: 186 MVGTGPKGHVSSLARCSIVNYNGD 209
>AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ12671 fis, clone NT2RM4002323, weakly similar to
ANTIGEN GOR. ).
Length = 353
Score = 39.5 bits (88), Expect = 0.008
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 6/144 (4%)
Frame = +2
Query: 128 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 292
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 293 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 469
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 470 MVGIGYDGNDHMLARVSLVNKFGD 541
MVG G G+ LAR S+VN GD
Sbjct: 186 MVGTGPKGHVSSLARCSIVNYNGD 209
>BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated
exonuclease gene 20kDa-like 1 protein.
Length = 325
Score = 35.9 bits (79), Expect = 0.093
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 443 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGD 541
+K +A+DCEMVG G G LAR S+V+ GD
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGD 140
>BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein.
Length = 327
Score = 35.9 bits (79), Expect = 0.093
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 443 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGD 541
+K +A+DCEMVG G G LAR S+V+ GD
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGD 140
>AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein
SBBI58 protein.
Length = 325
Score = 35.9 bits (79), Expect = 0.093
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 443 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGD 541
+K +A+DCEMVG G G LAR S+V+ GD
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGD 140
>X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein.
Length = 181
Score = 33.1 bits (72), Expect = 0.65
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 452 IAMDCEMVGIGYDGNDHMLARVSLVNKFG 538
+AMDCEMVG+G + LAR SLVN G
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHG 35
>U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein.
Length = 181
Score = 33.1 bits (72), Expect = 0.65
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 452 IAMDCEMVGIGYDGNDHMLARVSLVNKFG 538
+AMDCEMVG+G + LAR SLVN G
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHG 35
>CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein.
Length = 181
Score = 33.1 bits (72), Expect = 0.65
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 452 IAMDCEMVGIGYDGNDHMLARVSLVNKFG 538
+AMDCEMVG+G + LAR SLVN G
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHG 35
>BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated gene
20kDa protein.
Length = 181
Score = 33.1 bits (72), Expect = 0.65
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 452 IAMDCEMVGIGYDGNDHMLARVSLVNKFG 538
+AMDCEMVG+G + LAR SLVN G
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHG 35
>BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein.
Length = 87
Score = 33.1 bits (72), Expect = 0.65
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 452 IAMDCEMVGIGYDGNDHMLARVSLVNKFG 538
+AMDCEMVG+G + LAR SLVN G
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHG 35
>BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated
exonuclease gene 20kDa protein.
Length = 181
Score = 33.1 bits (72), Expect = 0.65
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 452 IAMDCEMVGIGYDGNDHMLARVSLVNKFG 538
+AMDCEMVG+G + LAR SLVN G
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHG 35
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 422 KQAKNK 439
+QAK +
Sbjct: 107 EQAKRQ 112
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 422 KQAKNK 439
+QAK +
Sbjct: 107 EQAKRQ 112
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 422 KQAKNK 439
+QAK +
Sbjct: 107 EQAKRQ 112
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 422 KQAKNK 439
+QAK +
Sbjct: 107 EQAKRQ 112
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 422 KQAKNK 439
+QAK +
Sbjct: 107 EQAKRQ 112
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 422 KQAKNK 439
+QAK +
Sbjct: 107 EQAKRQ 112
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 422 KQAKNK 439
+QAK +
Sbjct: 107 EQAKRQ 112
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 242 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 421
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 73 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 132
Query: 422 KQAKNK 439
+QAK +
Sbjct: 133 EQAKRQ 138
>BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag domain
containing 4 protein.
Length = 569
Score = 29.9 bits (64), Expect = 6.1
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +2
Query: 98 FIFGINMVENSHKRKRTASDDHNQTVSLRGLINANWQKLL-ASNLLMDHKEEKQAPKEQY 274
F F + E + + S+D +Q L + + +K + A M KEE++ KE+
Sbjct: 327 FPFAPSPNEEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEE 386
Query: 275 TGKFRRNRKTEQKINKSKDLQPTVR-KFETLNLEPDQADGHED 400
K + E++ K K+ + +R K E D+ D ED
Sbjct: 387 MKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDED 429
>BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein.
Length = 569
Score = 29.9 bits (64), Expect = 6.1
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +2
Query: 98 FIFGINMVENSHKRKRTASDDHNQTVSLRGLINANWQKLL-ASNLLMDHKEEKQAPKEQY 274
F F + E + + S+D +Q L + + +K + A M KEE++ KE+
Sbjct: 327 FPFAPSPNEEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEE 386
Query: 275 TGKFRRNRKTEQKINKSKDLQPTVR-KFETLNLEPDQADGHED 400
K + E++ K K+ + +R K E D+ D ED
Sbjct: 387 MKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDED 429
>AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 6.1
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +2
Query: 98 FIFGINMVENSHKRKRTASDDHNQTVSLRGLINANWQKLL-ASNLLMDHKEEKQAPKEQY 274
F F + E + + S+D +Q L + + +K + A M KEE++ KE+
Sbjct: 447 FPFAPSPNEEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEE 506
Query: 275 TGKFRRNRKTEQKINKSKDLQPTVR-KFETLNLEPDQADGHED 400
K + E++ K K+ + +R K E D+ D ED
Sbjct: 507 MKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDED 549
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,459,613
Number of Sequences: 237096
Number of extensions: 1344155
Number of successful extensions: 3457
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3453
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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