Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18d05
         (633 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071731-1|AAH71731.1|  328|Homo sapiens ATP synthase mitochondr...    94   3e-19
BC018781-1|AAH18781.1|  328|Homo sapiens ATP synthase mitochondr...    94   3e-19
BC008498-1|AAH08498.1|  328|Homo sapiens ATP synthase mitochondr...    94   3e-19
AL593856-2|CAI16978.1|  328|Homo sapiens ATP synthase mitochondr...    94   3e-19
AL136373-1|CAI14761.1|  328|Homo sapiens ATP synthase mitochondr...    94   3e-19
AK026004-1|BAB15316.1|  328|Homo sapiens protein ( Homo sapiens ...    94   3e-19

>BC071731-1|AAH71731.1|  328|Homo sapiens ATP synthase mitochondrial
           F1 complex assembly factor 1 protein.
          Length = 328

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
 Frame = +3

Query: 126 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 305
           L+ NP+Y++Y ++I  L+ + P  F  R+E+              S        V     
Sbjct: 71  LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127

Query: 306 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 473
           ALGK+ +N     DK L  IF IE+V +K++ EIK IW++Y   K+ + A IP + +  I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187

Query: 474 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVXKENA 614
                  P FL  LPR +GYEF + Q  G  +HFT L+  Q   E A
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAA 234


>BC018781-1|AAH18781.1|  328|Homo sapiens ATP synthase mitochondrial
           F1 complex assembly factor 1 protein.
          Length = 328

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
 Frame = +3

Query: 126 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 305
           L+ NP+Y++Y ++I  L+ + P  F  R+E+              S        V     
Sbjct: 71  LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127

Query: 306 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 473
           ALGK+ +N     DK L  IF IE+V +K++ EIK IW++Y   K+ + A IP + +  I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187

Query: 474 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVXKENA 614
                  P FL  LPR +GYEF + Q  G  +HFT L+  Q   E A
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAA 234


>BC008498-1|AAH08498.1|  328|Homo sapiens ATP synthase mitochondrial
           F1 complex assembly factor 1 protein.
          Length = 328

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
 Frame = +3

Query: 126 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 305
           L+ NP+Y++Y ++I  L+ + P  F  R+E+              S        V     
Sbjct: 71  LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127

Query: 306 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 473
           ALGK+ +N     DK L  IF IE+V +K++ EIK IW++Y   K+ + A IP + +  I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187

Query: 474 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVXKENA 614
                  P FL  LPR +GYEF + Q  G  +HFT L+  Q   E A
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAA 234


>AL593856-2|CAI16978.1|  328|Homo sapiens ATP synthase mitochondrial
           F1 complex assembly factor 1 protein.
          Length = 328

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
 Frame = +3

Query: 126 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 305
           L+ NP+Y++Y ++I  L+ + P  F  R+E+              S        V     
Sbjct: 71  LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127

Query: 306 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 473
           ALGK+ +N     DK L  IF IE+V +K++ EIK IW++Y   K+ + A IP + +  I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187

Query: 474 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVXKENA 614
                  P FL  LPR +GYEF + Q  G  +HFT L+  Q   E A
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAA 234


>AL136373-1|CAI14761.1|  328|Homo sapiens ATP synthase mitochondrial
           F1 complex assembly factor 1 protein.
          Length = 328

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
 Frame = +3

Query: 126 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 305
           L+ NP+Y++Y ++I  L+ + P  F  R+E+              S        V     
Sbjct: 71  LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127

Query: 306 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 473
           ALGK+ +N     DK L  IF IE+V +K++ EIK IW++Y   K+ + A IP + +  I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187

Query: 474 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVXKENA 614
                  P FL  LPR +GYEF + Q  G  +HFT L+  Q   E A
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAA 234


>AK026004-1|BAB15316.1|  328|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22351 fis, clone HRC06325. ).
          Length = 328

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
 Frame = +3

Query: 126 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 305
           L+ NP+Y++Y ++I  L+ + P  F  R+E+              S        V     
Sbjct: 71  LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127

Query: 306 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 473
           ALGK+ +N     DK L  IF IE+V +K++ EIK IW++Y   K+ + A IP + +  I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187

Query: 474 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVXKENA 614
                  P FL  LPR +GYEF + Q  G  +HFT L+  Q   E A
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAA 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,115,543
Number of Sequences: 237096
Number of extensions: 1808383
Number of successful extensions: 11061
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11055
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)