Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18d05
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55369-2|AAK52183.2|  526|Caenorhabditis elegans Udp-glucuronosy...    31   0.52 
AC006807-4|AAK84618.1|  904|Caenorhabditis elegans Hypothetical ...    31   0.91 
AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical ...    31   0.91 
AF100663-2|AAC68981.2|  532|Caenorhabditis elegans Udp-glucurono...    30   1.6  
L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z81084-4|CAB03109.2|  476|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF067946-1|AAC17686.3|  275|Caenorhabditis elegans Hypothetical ...    27   8.4  

>U55369-2|AAK52183.2|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein48 protein.
          Length = 526

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 108 EKALENLKTNPYYEKYANRIAELQNTSPEEFMERV 212
           E A++ +  NP Y++ ANR+ +L  + P+   ER+
Sbjct: 427 EGAIKEILVNPTYQEKANRLKKLMRSKPQSASERL 461


>AC006807-4|AAK84618.1|  904|Caenorhabditis elegans Hypothetical
           protein Y58A7A.4 protein.
          Length = 904

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 363 ELVIDKSSTEIKSIWEEYHQN---KEVISATIPVDVYSNIKETMNHFPVFL 506
           EL + KSS+E K    E  +N   +E I+  +P+D+ +   + M + P+F+
Sbjct: 548 ELFLIKSSSETKIKCTECLRNEFYREFIARRLPIDLQTETADEMEYLPIFI 598


>AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical
           protein Y58A7A.3 protein.
          Length = 883

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 363 ELVIDKSSTEIKSIWEEYHQN---KEVISATIPVDVYSNIKETMNHFPVFL 506
           EL + KSS+E K    E  +N   +E I+  +P+D+ +   + M + P+F+
Sbjct: 529 ELFLIKSSSETKIKCTECLRNEFYREFIARRLPIDLQTETADEMEYLPIFI 579


>AF100663-2|AAC68981.2|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein19 protein.
          Length = 532

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
 Frame = +3

Query: 108 EKALENLKTNPYYEKYANRIAEL---QNTSPEE-FMERVE 215
           +  +E +  NP Y K A R+AE+   Q T+P+E F++ VE
Sbjct: 426 QSTIEEVLNNPEYRKSAERVAEMLRNQPTNPKETFLKYVE 465


>L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical
           protein ZC262.3b protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = +3

Query: 357 KIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNHFPVFLFPLPRS 524
           ++E + +K +  ++ + + YHQ  E +  +     Y++ +E +NHF      +P+S
Sbjct: 550 QMESLHEKYTKRVQIVRDNYHQQVEALRVS-----YASQQEKLNHFVCLSITIPKS 600


>Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical
           protein T03E6.6 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 155 IFLIVGISFQILKCLLHSHR 96
           IF +VG++  +L CL+ SHR
Sbjct: 57  IFCVVGLNINLLNCLVISHR 76


>Z81084-4|CAB03109.2|  476|Caenorhabditis elegans Hypothetical
           protein F46A9.3a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +3

Query: 345 EDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNHFPVFL 506
           EDI K  L  D +S    SIWE    N+  I+    + V+  I  T+  F +FL
Sbjct: 19  EDILKAFLEEDFNSQHYDSIWECLQHNRRAIAVNGFIIVFLIIYTTIGGF-IFL 71


>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
           protein F46F11.9b protein.
          Length = 1282

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +3

Query: 261 SVDTRQFSSVLNPKQALGKEINVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNK 428
           S+ T +  +++N         N P + L DI K+E+   K+    + +W E  +N+
Sbjct: 594 SLQTERLRTIVNALDIYFPHRNEPVEMLTDIPKVEMETVKAIYGERPLWNEIDENE 649


>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
           protein F46F11.9a protein.
          Length = 1280

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +3

Query: 261 SVDTRQFSSVLNPKQALGKEINVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNK 428
           S+ T +  +++N         N P + L DI K+E+   K+    + +W E  +N+
Sbjct: 592 SLQTERLRTIVNALDIYFPHRNEPVEMLTDIPKVEMETVKAIYGERPLWNEIDENE 647


>U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical
           protein AH9.4 protein.
          Length = 364

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 251 LFCFIFLSLVTLFDSFHEFLWRCIL*LCYSVSIFLIVGIS-FQILKCLLHSHRSCSKTAS 75
           ++C+ FLS++     FH F +R I     +   FL   +  FQI   +  ++R   K+  
Sbjct: 101 VWCWFFLSVLRYIAVFHPFKYRTIWRQPRNALKFLAGAVGMFQIYTLIFVTYRQEEKSCG 160

Query: 74  SY 69
            Y
Sbjct: 161 EY 162


>U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical
           protein F59C12.3 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = +3

Query: 333 DKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISA 443
           +KK E++  +    D+   ++  +WEE H+  +++ +
Sbjct: 278 EKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVES 314


>AF067946-1|AAC17686.3|  275|Caenorhabditis elegans Hypothetical
           protein W02G9.5 protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = +3

Query: 405 WEEYHQNKEVISATIPVDVYSNIKETMNHFPVFLFPLPRSQGYEFIMCQMYG 560
           WE   +  +V   T   D+    +   +HF     PL +  GYE +  Q +G
Sbjct: 103 WEHRWRGLQVELPTFDADILGLQEVQADHFVEHFQPLMKKYGYEGVYKQKFG 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,170,361
Number of Sequences: 27780
Number of extensions: 297616
Number of successful extensions: 851
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)