Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18c16
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p pro...   161   9e-40
AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar pro...   161   9e-40
AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA...   161   9e-40
AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3....   155   4e-38
AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA ...   155   4e-38
AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-P...    56   5e-08
AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p pro...    55   6e-08
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    29   4.7  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    29   4.7  

>AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p
           protein.
          Length = 246

 Score =  161 bits (390), Expect = 9e-40
 Identities = 79/89 (88%), Positives = 84/89 (94%)
 Frame = +2

Query: 323 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 502
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 503 VMKEAAFSLAEAKFTTGDFNQVVLQNVTK 589
           VMKEAAFSLAEAKFT+GD NQVVLQNVTK
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTK 89


>AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar
           proton-translocatingATPase subunit D protein.
          Length = 246

 Score =  161 bits (390), Expect = 9e-40
 Identities = 79/89 (88%), Positives = 84/89 (94%)
 Frame = +2

Query: 323 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 502
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 503 VMKEAAFSLAEAKFTTGDFNQVVLQNVTK 589
           VMKEAAFSLAEAKFT+GD NQVVLQNVTK
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTK 89


>AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA
           protein.
          Length = 246

 Score =  161 bits (390), Expect = 9e-40
 Identities = 79/89 (88%), Positives = 84/89 (94%)
 Frame = +2

Query: 323 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 502
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 503 VMKEAAFSLAEAKFTTGDFNQVVLQNVTK 589
           VMKEAAFSLAEAKFT+GD NQVVLQNVTK
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTK 89


>AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3.4
           protein.
          Length = 249

 Score =  155 bits (376), Expect = 4e-38
 Identities = 75/89 (84%), Positives = 81/89 (91%)
 Frame = +2

Query: 323 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 502
           M+ KDRL IFPSRGAQ L+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60

Query: 503 VMKEAAFSLAEAKFTTGDFNQVVLQNVTK 589
           VMKEAAFSLAE KFTTGD NQ+VLQNVTK
Sbjct: 61  VMKEAAFSLAEVKFTTGDINQIVLQNVTK 89


>AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA
           protein.
          Length = 249

 Score =  155 bits (376), Expect = 4e-38
 Identities = 75/89 (84%), Positives = 81/89 (91%)
 Frame = +2

Query: 323 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 502
           M+ KDRL IFPSRGAQ L+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60

Query: 503 VMKEAAFSLAEAKFTTGDFNQVVLQNVTK 589
           VMKEAAFSLAE KFTTGD NQ+VLQNVTK
Sbjct: 61  VMKEAAFSLAEVKFTTGDINQIVLQNVTK 89


>AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-PA
           protein.
          Length = 373

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 323 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 499
           M+ +D L IFPSR   +++K R+  A +G GLLK+K DA+ ++ R  L +I   + + G 
Sbjct: 1   MAKRDILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59

Query: 500 EVMKEAAFSLAEAKFTTGDF 559
           E M+ A FS+A+A     DF
Sbjct: 60  EAMRNAIFSMAKANLLGADF 79


>AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p
           protein.
          Length = 373

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 323 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 499
           M+ +D L +FPSR   +++K R+  A +G GLLK+K DA+ ++ R  L +I   + + G 
Sbjct: 1   MAKRDILPVFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59

Query: 500 EVMKEAAFSLAEAKFTTGDF 559
           E M+ A FS+A+A     DF
Sbjct: 60  EAMRNAIFSMAKANLLGADF 79


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 553 SSCELSFSQRESSFFHHFTHKG 488
           S CELSFSQRE    H  TH G
Sbjct: 514 SECELSFSQREVLKRHMDTHTG 535


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 553 SSCELSFSQRESSFFHHFTHKG 488
           S CELSFSQRE    H  TH G
Sbjct: 514 SECELSFSQREVLKRHMDTHTG 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,228,771
Number of Sequences: 53049
Number of extensions: 473091
Number of successful extensions: 868
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)