Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18c06
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-2|AAB53826.1| 262|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical pr... 30 1.5
AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative treh... 30 1.5
AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p... 30 1.5
AL023853-1|CAA19558.1| 370|Caenorhabditis elegans Hypothetical ... 29 1.9
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical ... 28 5.9
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine re... 27 7.8
>U00048-2|AAB53826.1| 262|Caenorhabditis elegans Hypothetical
protein C05D11.5 protein.
Length = 262
Score = 108 bits (259), Expect = 3e-24
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Frame = +2
Query: 122 KFCANLSFMFAEASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAINL 301
+ ANL+ +F +L+RY A AGFK VE P+ E++R A L+ IN
Sbjct: 6 RVAANLNMLFTNLP-LLQRYGAAASAGFKLVEVSIPYTEPAEKLREAADEYHLKHTLINA 64
Query: 302 KTGDTTKGEVGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAG--KVENPTPKHWET 475
G+ G G+ S+ + EF+ +L+T IEYAKAL ++H+MAG K ++ +T
Sbjct: 65 PPGNWDDGFRGLASLKSAKKEFRKSLDTAIEYAKALGCCRVHVMAGIPKSDDDLENAHQT 124
Query: 476 FEKNLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVD 601
+ +N+ +A + K + LIEPIN+Y++P Y L++Y A+D
Sbjct: 125 YSENVRFAAEKFKEHKLICLIEPINKYTIPGYHLNNYEDAMD 166
>Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical
protein F21D9.5 protein.
Length = 839
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 128 CANLSFMFAEASSILERYALAKDAGF 205
C NL F+F A ++ Y LAK AGF
Sbjct: 185 CQNLRFLFVPARTLRYSYVLAKSAGF 210
>Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical protein
F19H8.1 protein.
Length = 1229
Score = 29.9 bits (64), Expect = 1.5
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +2
Query: 251 VRNAKQSAGLQQIA------INLKTGDTTKGEVGVTSVPGKEDEFKTNLNTTIEYAKALD 412
+RNAK+S L+QI K+G +K EV + + EF+ +L+ I+Y ++ D
Sbjct: 838 LRNAKES--LEQICKPGTHTAEFKSGPDSK-EVAHFEIDNELQEFERDLSF-IDYVQSDD 893
Query: 413 AKKIHIMAGKVENPTPKHWETFEKNLLYAVDVL 511
A + + + P ET++K + AV++L
Sbjct: 894 ADNVEQFVDTLISSHPISVETYKKEVENAVELL 926
>AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative trehalose
6-phosphatesynthase protein.
Length = 1229
Score = 29.9 bits (64), Expect = 1.5
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +2
Query: 251 VRNAKQSAGLQQIA------INLKTGDTTKGEVGVTSVPGKEDEFKTNLNTTIEYAKALD 412
+RNAK+S L+QI K+G +K EV + + EF+ +L+ I+Y ++ D
Sbjct: 838 LRNAKES--LEQICKPGTHTAEFKSGPDSK-EVAHFEIDNELQEFERDLSF-IDYVQSDD 893
Query: 413 AKKIHIMAGKVENPTPKHWETFEKNLLYAVDVL 511
A + + + P ET++K + AV++L
Sbjct: 894 ADNVEQFVDTLISSHPISVETYKKEVENAVELL 926
>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1230
Score = 29.9 bits (64), Expect = 1.5
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +2
Query: 251 VRNAKQSAGLQQIA------INLKTGDTTKGEVGVTSVPGKEDEFKTNLNTTIEYAKALD 412
+RNAK+S L+QI K+G +K EV + + EF+ +L+ I+Y ++ D
Sbjct: 838 LRNAKES--LEQICKPGTHTAEFKSGPDSK-EVAHFEIDNELQEFERDLSF-IDYVQSDD 893
Query: 413 AKKIHIMAGKVENPTPKHWETFEKNLLYAVDVL 511
A + + + P ET++K + AV++L
Sbjct: 894 ADNVEQFVDTLISSHPISVETYKKEVENAVELL 926
>AL023853-1|CAA19558.1| 370|Caenorhabditis elegans Hypothetical
protein Y71A12C.1 protein.
Length = 370
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 434 AGKVENPTPKHWETFEKNLLYAVDVLKGENIQGLIEPINQYSM 562
A K++NPT HW N + +D LK N I P +Q S+
Sbjct: 133 AKKLQNPTCHHWSLL--NQITTIDFLKKINFPQAINPEDQGSI 173
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 155 EASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAINLKTGDTTKGEVG 334
E + +E Y ++ FKA+E PF L + A +++ + T +TT + G
Sbjct: 79 ETLNPIEEYIELFESSFKAIEVRLPFDVILNDEKKPDWDAIRRKLIMGSLTVNTTSEKPG 138
Query: 335 VTS 343
+T+
Sbjct: 139 ITT 141
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 155 EASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAINLKTGDTTKGEVG 334
E + +E Y ++ FKA+E PF L + A +++ + T +TT + G
Sbjct: 79 ETLNPIEEYIELFESSFKAIEVRLPFDVILNDEKKPDWDAIRRKLIMGSLTVNTTSEKPG 138
Query: 335 VTS 343
+T+
Sbjct: 139 ITT 141
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 155 EASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAINLKTGDTTKGEVG 334
E + +E Y ++ FKA+E PF L + A +++ + T +TT + G
Sbjct: 79 ETLNPIEEYIELFESSFKAIEVRLPFDVILNDEKKPDWDAIRRKLIMGSLTVNTTSEKPG 138
Query: 335 VTS 343
+T+
Sbjct: 139 ITT 141
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 155 EASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAINLKTGDTTKGEVG 334
E + +E Y ++ FKA+E PF L + A +++ + T +TT + G
Sbjct: 79 ETLNPIEEYIELFESSFKAIEVRLPFDVILNDEKKPDWDAIRRKLIMGSLTVNTTSEKPG 138
Query: 335 VTS 343
+T+
Sbjct: 139 ITT 141
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 155 EASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAINLKTGDTTKGEVG 334
E + +E Y ++ FKA+E PF L + A +++ + T +TT + G
Sbjct: 79 ETLNPIEEYIELFESSFKAIEVRLPFDVILNDEKKPDWDAIRRKLIMGSLTVNTTSEKPG 138
Query: 335 VTS 343
+T+
Sbjct: 139 ITT 141
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 155 EASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAINLKTGDTTKGEVG 334
E + +E Y ++ FKA+E PF L + A +++ + T +TT + G
Sbjct: 79 ETLNPIEEYIELFESSFKAIEVRLPFDVILNDEKKPDWDAIRRKLIMGSLTVNTTSEKPG 138
Query: 335 VTS 343
+T+
Sbjct: 139 ITT 141
>AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical
protein ZK1240.9 protein.
Length = 216
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 374 NLNTTIEYAKALDAKKIHIMAGKVENPTPKH 466
NLN + KA K+ +A K+E PT KH
Sbjct: 186 NLNLRLYEEKAQALAKLKTIAQKIEKPTKKH 216
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 353 KEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPKHWETFEKNLLYAVDVLK 514
K DE LN I K ++ I + P PK TF++ L VD L+
Sbjct: 159 KVDEITKELNARIGKVKRTESLSIGMNRHHAPVPPPKPLRTFQEQLRKPVDQLQ 212
>AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 12 protein.
Length = 293
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 273 ALCFAFLTCSKLKPKGKPDSTALNPASLAKAYRSKMEEASANI 145
ALCF +K + KGK + T LN +L R + + N+
Sbjct: 186 ALCFQLFMLNKREKKGKNELTKLNRLALIDGVRVLLADFLPNL 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,999,711
Number of Sequences: 27780
Number of extensions: 260523
Number of successful extensions: 689
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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