Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18c05
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113333-1|AAM29338.1|  543|Drosophila melanogaster AT31036p pro...    28   3.8  
AF132187-1|AAD34775.1|  543|Drosophila melanogaster unknown prot...    28   3.8  
AE014297-455|AAF54126.3|  543|Drosophila melanogaster CG1024-PA ...    28   3.8  
BT022805-1|AAY55221.1|  753|Drosophila melanogaster IP13758p pro...    27   6.7  
BT022776-1|AAY55192.1|  753|Drosophila melanogaster IP13958p pro...    27   6.7  
AE014297-3006|AAF55893.1|  747|Drosophila melanogaster CG7907-PA...    27   6.7  

>AY113333-1|AAM29338.1|  543|Drosophila melanogaster AT31036p
           protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 108 HLHLKKKFKEFNFIQLIKLFFE 173
           H +LKK + +FNFIQ+ + F E
Sbjct: 51  HDYLKKTYSDFNFIQIDERFHE 72


>AF132187-1|AAD34775.1|  543|Drosophila melanogaster unknown
           protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 108 HLHLKKKFKEFNFIQLIKLFFE 173
           H +LKK + +FNFIQ+ + F E
Sbjct: 51  HDYLKKTYSDFNFIQIDQRFHE 72


>AE014297-455|AAF54126.3|  543|Drosophila melanogaster CG1024-PA
           protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 108 HLHLKKKFKEFNFIQLIKLFFE 173
           H +LKK + +FNFIQ+ + F E
Sbjct: 51  HDYLKKTYSDFNFIQIDERFHE 72


>BT022805-1|AAY55221.1|  753|Drosophila melanogaster IP13758p
           protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 160 LINWIKLNSLNFFFKCKW 107
           L+NW+  +  NF F C+W
Sbjct: 420 LVNWVSHHISNFGFNCQW 437


>BT022776-1|AAY55192.1|  753|Drosophila melanogaster IP13958p
           protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 160 LINWIKLNSLNFFFKCKW 107
           L+NW+  +  NF F C+W
Sbjct: 420 LVNWVSHHISNFGFNCQW 437


>AE014297-3006|AAF55893.1|  747|Drosophila melanogaster CG7907-PA
           protein.
          Length = 747

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 160 LINWIKLNSLNFFFKCKW 107
           L+NW+  +  NF F C+W
Sbjct: 420 LVNWVSHHISNFGFNCQW 437


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,619,593
Number of Sequences: 53049
Number of extensions: 106332
Number of successful extensions: 179
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)