Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18c02
         (620 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D61380-1|BAA09603.2|  189|Homo sapiens DJ-1 protein protein.          155   2e-37
BC008188-1|AAH08188.1|  189|Homo sapiens Parkinson disease (auto...   155   2e-37
AL034417-1|CAB52550.1|  189|Homo sapiens Parkinson disease (auto...   155   2e-37
AF021819-1|AAC12806.1|  189|Homo sapiens RNA-binding protein reg...   155   2e-37
AB073864-1|BAB71782.1|  189|Homo sapiens DJ-1 protein.                155   2e-37
AY648999-1|AAT68961.1|   52|Homo sapiens DJ-1 protein.                 41   0.004

>D61380-1|BAA09603.2|  189|Homo sapiens DJ-1 protein protein.
          Length = 189

 Score =  155 bits (375), Expect = 2e-37
 Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
 Frame = +3

Query: 102 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 281
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 282 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 461
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 462 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTG 620
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L G
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNG 174


>BC008188-1|AAH08188.1|  189|Homo sapiens Parkinson disease
           (autosomal recessive, early onset) 7 protein.
          Length = 189

 Score =  155 bits (375), Expect = 2e-37
 Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
 Frame = +3

Query: 102 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 281
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 282 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 461
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 462 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTG 620
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L G
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNG 174


>AL034417-1|CAB52550.1|  189|Homo sapiens Parkinson disease
           (autosomal recessive, early onset) 7 protein.
          Length = 189

 Score =  155 bits (375), Expect = 2e-37
 Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
 Frame = +3

Query: 102 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 281
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 282 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 461
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 462 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTG 620
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L G
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNG 174


>AF021819-1|AAC12806.1|  189|Homo sapiens RNA-binding protein
           regulatory subunit protein.
          Length = 189

 Score =  155 bits (375), Expect = 2e-37
 Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
 Frame = +3

Query: 102 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 281
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 282 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 461
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121

Query: 462 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTG 620
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L G
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNG 174


>AB073864-1|BAB71782.1|  189|Homo sapiens DJ-1 protein.
          Length = 189

 Score =  155 bits (375), Expect = 2e-37
 Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
 Frame = +3

Query: 102 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 281
           SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G  PV CSR V + PD SL +A 
Sbjct: 3   SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62

Query: 282 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 461
            E   YD V+LPGG  G+ +LS+S  V  +LK+ E+                 H +  G 
Sbjct: 63  KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGCGS 121

Query: 462 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTG 620
           +VT++P  +DK ++ G YTY E  RV  DG ++TSRGPGT++ F L ++E L G
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNG 174


>AY648999-1|AAT68961.1|   52|Homo sapiens DJ-1 protein.
          Length = 52

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 510 YTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTG 620
           YTY E  RV  D  ++TSRGPGT++ F L ++E L G
Sbjct: 2   YTYSEN-RVEKDSLILTSRGPGTSFEFALAIVEALNG 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,742,002
Number of Sequences: 237096
Number of extensions: 1517714
Number of successful extensions: 3594
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3556
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)