Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18b24
(226 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 32 0.063
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 31 0.11
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 31 0.11
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 30 0.19
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 30 0.19
Z81540-10|CAB04398.1| 354|Caenorhabditis elegans Hypothetical p... 30 0.25
Z68336-4|CAA92739.2| 269|Caenorhabditis elegans Hypothetical pr... 29 0.59
AF025466-4|AAY55877.1| 173|Caenorhabditis elegans Hypothetical ... 28 0.78
Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 26 3.1
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 26 3.1
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 26 3.1
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 26 3.1
AC006733-6|AAF60489.2| 581|Caenorhabditis elegans Hypothetical ... 26 3.1
Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 25 5.5
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 25 5.5
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 25 5.5
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 25 5.5
Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 25 7.2
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 25 7.2
AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and cap... 25 7.2
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 25 9.6
U80840-9|AAB37924.1| 289|Caenorhabditis elegans Hypothetical pr... 25 9.6
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 25 9.6
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.063
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 83 DVFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAGSC 211
D+++ + IP+ L +DR+GR+ L F AG+C
Sbjct: 395 DIYVNFIFAAFVEIPALFIVYLLIDRIGRRLILAGGLFIAGAC 437
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 223 HGGRTRASREC-CKHKEELPPEPVHAEDREDVGGYGGRDG 107
+GG R +C C + PP P E E G+ G+DG
Sbjct: 131 NGGGPRGGNQCQCTVENSCPPGPAGPEGEEGPDGHDGQDG 170
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 223 HGGRTRASREC-CKHKEELPPEPVHAEDREDVGGYGGRDG 107
+GG R +C C + PP P E E G+ G+DG
Sbjct: 131 NGGGPRGGNQCQCTVENSCPPGPAGPEGEEGPDGHDGQDG 170
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 30.3 bits (65), Expect = 0.19
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 169 PPEPVHAEDREDVGGYGGRDGDERLHEDVRVYVRVALRGGG 47
PP P + R D G R+ D+R R +R A RGGG
Sbjct: 336 PPPPPSSSSRRDYSHQGDRN-DDRFENHRRGVIRGASRGGG 375
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 30.3 bits (65), Expect = 0.19
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 169 PPEPVHAEDREDVGGYGGRDGDERLHEDVRVYVRVALRGGG 47
PP P + R D G R+ D+R R +R A RGGG
Sbjct: 336 PPPPPSSSSRRDYSHQGDRN-DDRFENHRRGVIRGASRGGG 375
>Z81540-10|CAB04398.1| 354|Caenorhabditis elegans Hypothetical
protein F46B3.9 protein.
Length = 354
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 147 RTAKMLEGMAAATVMSDSMKTSECMCESHCAAAECVPSRVT 25
+ K++ G D +C SHC ECVP VT
Sbjct: 156 QNCKLVNGSPKCVPELDQCSHIKCSIGSHCENGECVPDAVT 196
>Z68336-4|CAA92739.2| 269|Caenorhabditis elegans Hypothetical
protein F22B3.7 protein.
Length = 269
Score = 28.7 bits (61), Expect = 0.59
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 186 NTRKNFLPSLSMPRTAKMLEGMAAATVMSDSMKTSECM 73
+ R N P L P+T ++GM T + KT+ECM
Sbjct: 154 DVRTNLFPLLKTPQTYARMDGM-RTTACRATPKTAECM 190
>AF025466-4|AAY55877.1| 173|Caenorhabditis elegans Hypothetical
protein T23F4.5 protein.
Length = 173
Score = 28.3 bits (60), Expect = 0.78
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 217 GRTRASRECCKHKEELPPEPVHAEDREDVGGY 122
G +CCK ++ PP P +ED ++ G Y
Sbjct: 69 GTNDLEMKCCKIEKPPPPPPQRSEDYQERGHY 100
>Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical
protein C01G12.7 protein.
Length = 584
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 47 SAAAQCDSHIHSDVFMESLITVAAAIPSNIFAVLGMDRLGR 169
+A QCDSHI+S + I + A+ SNIF+ + + L R
Sbjct: 250 TAFFQCDSHINS---QDQCIQIVCAV-SNIFSAIFTELLTR 286
>Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical
protein DH11.4 protein.
Length = 374
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 85 RLHGVAHHRRGRHTLQHLRGPRHGQAREEVLPC 183
R +G + R G+H + G RHG+ R+E + C
Sbjct: 120 RPNGTKYGRAGKHEHREW-GDRHGELRDEKVAC 151
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 86 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAG 205
+F+ + + +P+ I L +DRLGR+ A F+AG
Sbjct: 377 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAG 416
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 86 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAG 205
+F+ + + +P+ I L +DRLGR+ A F+AG
Sbjct: 343 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAG 382
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -1
Query: 184 HKEELPPEPVHAEDREDVGGYGGRDGDERLHEDVRVYVRVALRGGGVRAEPRHVRRH 14
H E+ + + +GG GG D E E V + L GGG RH R H
Sbjct: 23 HSEDCDDDDYGNDGGIVLGGGGGGDSCEDGGEQQVVLIGQVLGGGGGGGGRRHHRGH 79
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 86 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAG 205
+F+ + + +P+ I L +DRLGR+ A F+AG
Sbjct: 377 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAG 416
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 86 VFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAG 205
+F+ + + +P+ I L +DRLGR+ A F+AG
Sbjct: 343 LFVTFVTSQLMELPAVIIVALLIDRLGRRIMYSGAIFTAG 382
>AC006733-6|AAF60489.2| 581|Caenorhabditis elegans Hypothetical
protein Y32H12A.5 protein.
Length = 581
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +2
Query: 17 TAYVTRLGTHSAAAQCDSHIHSDVFMESLITVAAAIPSNIFAVLGMDRL 163
T Y TR+ +CD S + + +AA + + + +GM +L
Sbjct: 489 TLYATRVPERCFPGKCDIWFQSHQLFHTFVVLAAFVHYHAISQMGMHKL 537
>Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical
protein B0513.5 protein.
Length = 616
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 59 QCDSHIHSDVFMESLITVAAAIPSNIFAVLGMDRLGRKFFLV 184
QCD + D+F +S+ VA+A + F + + LGR L+
Sbjct: 221 QCDKN--RDIFKDSINAVASATKNEGFVAVKITALGRPQLLL 260
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 208 RASRECCKHKEELPPEPVHAEDREDVG 128
R E C H+ +PP AE RE+ G
Sbjct: 89 RTDNENCTHEVAIPPNAEFAELRENSG 115
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 122 IPSNIFAVLGMDRLGRKFFLVFATFSAGSCSA 217
IP A+L R+G +VFA FSA S +A
Sbjct: 151 IPELAVAMLACARIGAMHSVVFAGFSAESLAA 182
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 122 IPSNIFAVLGMDRLGRKFFLVFATFSAGSCSA 217
IP A+L R+G +VFA FSA S +A
Sbjct: 161 IPELAVAMLACARIGAMHSVVFAGFSAESLAA 192
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 130 GGYGGRDGDERLHEDVRVYVRVALRGGGVRAEPR 29
GGYGG G + D Y R GG+R PR
Sbjct: 523 GGYGGGYGGPGAYGDFGAYGGGGFR-GGMRGSPR 555
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 84 SECMCESHCAAAECVPSRV 28
SEC+C+S C EC ++V
Sbjct: 1797 SECICKSACEHVECPNAQV 1815
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 25.4 bits (53), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 106 HRRGRHTLQHLRGPRHGQAREE 171
+ + H QH+ P HG+ EE
Sbjct: 140 YEKNEHEEQHMHHPNHGETMEE 161
>Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical
protein T20G5.2 protein.
Length = 468
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 136 LRGPRHGQAREEVLPCVCNILGWLVF 213
L GP HG A +EVL + I+G + F
Sbjct: 298 LAGPLHGLANQEVLVFLNKIVGEIGF 323
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical protein
ZC84.6 protein.
Length = 1474
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 90 KTSECMCESHCAAAEC 43
+T +C+ ESHC A +C
Sbjct: 1106 ETPQCVGESHCIAMKC 1121
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -1
Query: 214 RTRASRECCKHKEELPPEPVHAEDREDVGGYGGRDG---DERLHEDVR 80
R+R+S + + + P DR+D G RDG D + H+D R
Sbjct: 268 RSRSSSRSDRRRRDDRKRPREDRDRKDYRRDGRRDGRRDDRKRHDDRR 315
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -1
Query: 175 ELPPEPVHAEDREDVGGYGGR---DGDERLHEDVRV 77
ELP E V E ED YGG + + ++H ++R+
Sbjct: 810 ELPDEEVIYETYEDYPEYGGHYDLEEEHKMHHNMRL 845
>AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 2 protein.
Length = 900
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 109 GDERLHEDVRVYVRVALRGGG 47
G RL ED+++Y V + GGG
Sbjct: 16 GMGRLREDMKIYQLVDMHGGG 36
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 142 REDVGGYGGRDGDERLHEDVRVYVRVALRGGGVRAEPR 29
RED GYG + DE ++ + GGG R PR
Sbjct: 151 RED--GYGEDETDEDYFDEEEPVAELLPLGGGTRRVPR 186
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 142 REDVGGYGGRDGDERLHEDVRVYVRVALRGGGVRAEPR 29
RED GYG + DE ++ + GGG R PR
Sbjct: 149 RED--GYGEDETDEDYFDEEEPVAELLPLGGGTRRVPR 184
>U80840-9|AAB37924.1| 289|Caenorhabditis elegans Hypothetical
protein F08D12.3a protein.
Length = 289
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -1
Query: 217 GRTRASRECCKHKEELPPEPVHAEDREDVG 128
G+ +CC+ K+ P + EDVG
Sbjct: 232 GQVVVGSDCCEAKDVYDPSTATCQKNEDVG 261
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -1
Query: 187 KHKEELPPEPVHAEDREDVGGYGGRDGDERLHEDVRVYVRVALRG 53
+ K + P P H E+ +GGY G + D + + ++G
Sbjct: 688 RFKVGVMPVPKHPENYVKIGGYYVEKGTQLTESDPKYVITKTVKG 732
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,226,751
Number of Sequences: 27780
Number of extensions: 72395
Number of successful extensions: 317
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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