Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18b14
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   0.89 
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   2.1  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   3.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   3.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   8.3  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 144 EKNWLSGTTL*SAGMHRRNERLEKVSN 224
           EKNWL   T   +G++   E+ + +S+
Sbjct: 435 EKNWLPVHTSYKSGLNLEQEKKDSISH 461


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 178 VQECIAETKDWRKCQTAVNNFRDCINK 258
           + ECI   K   KC+  + NF  C +K
Sbjct: 115 LSECINANKSTDKCENGL-NFIICFSK 140


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 178 VQECIAETKDWRKCQTAVNNFRDCI 252
           +++C+   K+  KC TA   F  C+
Sbjct: 98  IRQCVDNAKNEDKCLTA-QKFSRCV 121


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 27  LQLDQKEINIATKTYFIRKYDYKTSRTD 110
           L LDQ+++        +RK D +  RTD
Sbjct: 365 LALDQEQLKSKKLEESMRKLDEEMKRTD 392


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 126 IIITADLFSRFYSHIFV*NTF*WQY*FLFGLTVAQQEHNLK 4
           +++T D     + H F    F     F+FG+   ++EH+L+
Sbjct: 164 LLMTVDAGDSMFVHTFG-AYFGLAISFVFGMKEKRKEHHLE 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,886
Number of Sequences: 438
Number of extensions: 1759
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)