Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18b11
(467 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 5.0
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 6.6
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 6.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 6.6
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 253 FELFNHSLHFGKYNLLYKKLFQYLLCNI 170
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 253 FELFNHSLHFGKYNLLYKKLFQYLLCNI 170
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 253 FELFNHSLHFGKYNLLYKKLFQYLLCNI 170
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 253 FELFNHSLHFGKYNLLYKKLFQYLLCNI 170
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 253 FELFNHSLHFGKYNLLYKKLFQYLLCNI 170
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 253 FELFNHSLHFGKYNLLYKKLFQYLLCNI 170
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 253 FELFNHSLHFGKYNLLYKKLFQYLLCNI 170
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 241 NHSLHFGKYNLLYKKLFQYLLCNI 170
N++ + YN YKKL Y + NI
Sbjct: 97 NYNNYNNNYNTNYKKLQYYNIINI 120
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 342 ICMINWNYNFIYTNSNCFHRLCLTL 416
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 342 ICMINWNYNFIYTNSNCFHRLCLTL 416
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 342 ICMINWNYNFIYTNSNCFHRLCLTL 416
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 342 ICMINWNYNFIYTNSNCFHRLCLTL 416
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 342 ICMINWNYNFIYTNSNCFHRLCLTL 416
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 342 ICMINWNYNFIYTNSNCFHRLCLTL 416
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 5.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 166 TIYYTANIEIAFYRVNYICRNVNY 237
T++YT N+ + ++++C V Y
Sbjct: 233 TLFYTVNLILPTVLISFLCVLVFY 256
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 6.6
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 90 YFFLMKYRIPTSFMSNNSNYYWI--IFNNILHSKY*NSFL*SKL 215
++F++ + P +SN+ N+ I F LH + N + +L
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERL 274
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 160 FLTIYYTANIEIAFYRVNYICR 225
F+ +Y+A+ +AF+R+ CR
Sbjct: 357 FIYAFYSADFRLAFWRLT--CR 376
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 6.6
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 90 YFFLMKYRIPTSFMSNNSNYYWI--IFNNILHSKY*NSFL*SKL 215
++F++ + P +SN+ N+ I F LH + N + +L
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERL 274
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,738
Number of Sequences: 438
Number of extensions: 2529
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -