Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18b10
(378 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 136 5e-33
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 136 7e-33
05_01_0043 - 295041-295173,296252-296537,296616-296697 135 9e-33
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 134 2e-32
01_07_0267 + 42410174-42410252,42410679-42411097 124 2e-29
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 58 3e-09
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 30 0.53
09_01_0019 + 403078-404211 30 0.69
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 30 0.69
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 29 0.92
10_08_0401 + 17629912-17630376 29 1.2
08_02_0341 + 15994817-15994852,15995371-15995439,15995667-159959... 29 1.2
06_03_0363 + 19904002-19905792 29 1.2
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 2.8
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 27 3.7
11_06_0478 + 24073295-24074172,24074790-24075090 27 4.9
04_03_0831 - 20133298-20133401,20133500-20133586,20133984-201340... 27 4.9
05_04_0242 + 19336663-19336789,19337071-19337290,19337392-193374... 27 6.5
11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075 26 8.6
10_05_0115 - 9300918-9300972,9301299-9301396,9301476-9301556,930... 26 8.6
05_03_0507 + 14814761-14815272,14816215-14816346,14817391-14817403 26 8.6
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 26 8.6
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 136 bits (329), Expect = 5e-33
Identities = 63/102 (61%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 71 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 250
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 251 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVXFSGLAAGFXI 373
+AV+I+ + A Y L+ G+ HL +GLA +GLAAG I
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAI 113
Score = 32.7 bits (71), Expect = 0.099
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 65 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 238
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 239 YGLVVAVLIA 268
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 136 bits (328), Expect = 7e-33
Identities = 62/102 (60%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 71 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 250
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 251 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVXFSGLAAGFXI 373
+AV+I+ + A Y L+ G+ HL +GLA +GLAAG I
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAI 113
Score = 32.7 bits (71), Expect = 0.099
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 65 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 238
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 239 YGLVVAVLIA 268
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 135 bits (327), Expect = 9e-33
Identities = 62/102 (60%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 71 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 250
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 251 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVXFSGLAAGFXI 373
+AV+I+ + A Y L+ G+ HL +GLA +GLAAG I
Sbjct: 73 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAI 114
Score = 33.9 bits (74), Expect = 0.043
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +2
Query: 56 NPIYGPFF---GVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVM 220
NP P+F G +S + G A G A G A + + +P+L + I+ ++
Sbjct: 82 NPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIF 141
Query: 221 AGIIAIYGLVVAVLIA 268
A +A+YGL+V ++++
Sbjct: 142 AEALALYGLIVGIILS 157
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 134 bits (324), Expect = 2e-32
Identities = 61/102 (59%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 71 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 250
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 251 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVXFSGLAAGFXI 373
+AV+I+ + A Y L+ G+ HL +GLA +GLAAG I
Sbjct: 74 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAI 115
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +2
Query: 170 SVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 268
+ +P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 158 NAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 124 bits (299), Expect = 2e-29
Identities = 59/108 (54%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Frame = +2
Query: 53 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 232
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 233 AIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVXFSGLAAGFXI 373
IYGL++AV+I + A Y + G +HL AGLA LAAG I
Sbjct: 66 GIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAI 113
Score = 31.9 bits (69), Expect = 0.17
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +2
Query: 89 GAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 268
G A+ + A G A G G+ A + +P+L + I+ ++ A + +YGL+V ++++
Sbjct: 99 GLATGLCALAAGLAIGVV-GDAGVRA-NAQQPKLFVGMILILIFAEALGLYGLIVGIILS 156
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 57.6 bits (133), Expect = 3e-09
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = +2
Query: 77 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 256
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 257 VLIAGALQEPANYPLYKGFIHLGAGLAVXFSGLAAGF 367
+++ L E L L AG A+ SGL GF
Sbjct: 80 IILQTKL-ESVPTALVHHPESLRAGYAIFASGLIVGF 115
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 30.3 bits (65), Expect = 0.53
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 337 SQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDR 209
S+ ++ E KG+VG SNQ HD T D +T D++
Sbjct: 190 SRLDNKIAEVDTKGIVG-TKPSASNQHQHDGTTDSRHTVEDEK 231
>09_01_0019 + 403078-404211
Length = 377
Score = 29.9 bits (64), Expect = 0.69
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -3
Query: 250 DQTVDGNNTRHDDRNDRLHDQLRPHHRHXXXXXXXXXXXXXXXXGAEDDSRRRPHNSKEG 71
D T D + + +DR R H + + HHR + SRRR H E
Sbjct: 293 DDTSDEDESGGEDRRRRRHRKRQHHHRKGASDGDSGSGASDSADDRKRSSRRRRHRKSES 352
Query: 70 S 68
S
Sbjct: 353 S 353
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 29.9 bits (64), Expect = 0.69
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 163 RHVGDEA*ADHEVDHSCRHGGYYCHLRSGRGCPDCWCPP 279
R V + AD D CR G SG + +CPP
Sbjct: 16 REVSEALTADSSADEECRRGSSSSSASSGDASSESYCPP 54
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 29.5 bits (63), Expect = 0.92
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 268 WCPPGASQLPPLQRVHPLG 324
W PPG +LPPL +H G
Sbjct: 44 WAPPGEPRLPPLLLIHGFG 62
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 83 VMGAASAIIFSALGAAYGTAKSGTGIAA 166
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>08_02_0341 +
15994817-15994852,15995371-15995439,15995667-15995973,
15996231-15996253
Length = 144
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 274 GTSNQDSHDQTVDGNNTRHDDRNDRL 197
G + + HD ++DG N +DD D L
Sbjct: 98 GAEDDNGHDVSIDGLNANNDDNGDEL 123
>06_03_0363 + 19904002-19905792
Length = 596
Score = 29.1 bits (62), Expect = 1.2
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +2
Query: 59 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGT-----GIAAMSVMRPELIMKSIIPVVMA 223
PIY +GAA +FS+L + T +A ++R + + P +
Sbjct: 400 PIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLR 459
Query: 224 GIIAIYGLVVAVLIAGALQEPANYP-LYKGFIHLGAGLAVXFSGLAA 361
+A LVV I + + Y + G+ G G A +GLAA
Sbjct: 460 TFLAFLALVVLSSIGVSAYYNSRYARRWPGYAAFGCGWAAGAAGLAA 506
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 370 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 266
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 373 YGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDD 212
YG+ G + + ++ VD P+V G+V + + S + TV T + D
Sbjct: 903 YGDKGPENLTKPGEPASSVDVPYVNGIVD-NSDSVQEEPSVEATVSATETSNVD 955
>11_06_0478 + 24073295-24074172,24074790-24075090
Length = 392
Score = 27.1 bits (57), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 322 GCWFGCXILWSGCRFXH 372
G W GC +LW G + H
Sbjct: 269 GPWQGCSVLWQGALYVH 285
>04_03_0831 -
20133298-20133401,20133500-20133586,20133984-20134092,
20134272-20134442,20136059-20136208,20136765-20136872,
20137725-20137780,20138061-20138124,20138198-20138209
Length = 286
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 71 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 220
P FGV + ++I +G+ Y +SG + A + L + PV++
Sbjct: 9 PTFGVGHSLGSVIHLLIGSRYAVQRSGNILMAFNNKEASLAVPLFSPVIV 58
>05_04_0242 +
19336663-19336789,19337071-19337290,19337392-19337437,
19337559-19337675
Length = 169
Score = 26.6 bits (56), Expect = 6.5
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +2
Query: 59 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 238
PIY P G + +IF+ L G + S TG+ +S P +M + ++ + +
Sbjct: 54 PIYFPI-GNLATGFFVIFALLAGVVGVSTSLTGLHDVSQGYPASMMSAAAASIVTWTLTL 112
Query: 239 YGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVXFSG-LAAG 364
+ +A P + + F + AG + +G L AG
Sbjct: 113 LAMGLACKEISIGWRPPSLRALETFTIILAGTQLLCAGSLHAG 155
>11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075
Length = 479
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 250 RGCPDCWCPPGASQLPPLQRVHPLGC 327
R CW G PP Q+ HP+ C
Sbjct: 10 RATVKCWDELGVCSSPPSQQQHPVVC 35
>10_05_0115 -
9300918-9300972,9301299-9301396,9301476-9301556,
9301635-9301726,9301832-9301859
Length = 117
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 212 VVMAGIIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVXFSG 352
+ M I+ + GL + + + LQ YKG I GAGL + G
Sbjct: 36 LAMGNILFLSGLGLTIGLKSTLQFFTKPKNYKGTISFGAGLLLVLIG 82
>05_03_0507 + 14814761-14815272,14816215-14816346,14817391-14817403
Length = 218
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 71 PFFGVMGAASAIIFSALGAAYGTAKSGT 154
PF G G A+ F A AYG A +GT
Sbjct: 102 PFLGGGGGATTAAFRAPSDAYGGAGAGT 129
>03_02_0168 +
6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 223 GYYCHLRSGRGCPDCWCPPGASQLPPL 303
GYY +G+ D WC PGAS P +
Sbjct: 455 GYYVKDATGKDF-DGWCWPGASSYPDM 480
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,894,212
Number of Sequences: 37544
Number of extensions: 266473
Number of successful extensions: 940
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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