Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18b09
(320 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical pr... 29 0.56
U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical pr... 27 4.0
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 26 7.0
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 26 7.0
AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical ... 26 7.0
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 26 7.0
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 25 9.2
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 25 9.2
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 25 9.2
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 25 9.2
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 25 9.2
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 25 9.2
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 25 9.2
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 25 9.2
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 25 9.2
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 25 9.2
AF036704-1|AAB88560.2| 293|Caenorhabditis elegans Hypothetical ... 25 9.2
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 25 9.2
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 25 9.2
>Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical
protein R10E8.3 protein.
Length = 522
Score = 29.5 bits (63), Expect = 0.56
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 11 LNADRSARLLLSTLSPHDNVFKAESCFDTAFGCESLAMIYK*ELTSNVRVTLIVHGEPVY 190
L+A +A +++ T D F E C ++FG ++ K N L+ G PVY
Sbjct: 114 LSALSNASIIMETNDRRDLEFLKEHCVRSSFG----KLVLKGSFDGNQACELLGFGAPVY 169
Query: 191 SRETFET 211
+ + +T
Sbjct: 170 ANRSIQT 176
>U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical
protein K04G7.1 protein.
Length = 558
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +1
Query: 10 SERRSVRALVTQYAFTSRQRVQGRELFRHGIRLRKSRDDIQVRADIERQGN 162
S R+ V+ + F + +++QGR++ + + + DI V GN
Sbjct: 145 SVRQDVKTFIASCDFCTAKKIQGRKITKAPVDITSEHFDISVLVRDSSSGN 195
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 25.8 bits (54), Expect = 7.0
Identities = 24/79 (30%), Positives = 30/79 (37%)
Frame = +1
Query: 49 AFTSRQRVQGRELFRHGIRLRKSRDDIQVRADIERQGNAHRAR*ASLFTRDIRNAPAVRY 228
++ R+R GR R R R R ++ N HR R RD +P
Sbjct: 1124 SYRDRRRFNGR---RSRSRSRSVSPQNYKRRKLDEHDNNHRQRSP---IRDRHTSP---- 1173
Query: 229 GGRATPSVRTRGNNIYPRL 285
GG TPS G Y RL
Sbjct: 1174 GGEKTPSSNNSGERNYKRL 1192
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 25.8 bits (54), Expect = 7.0
Identities = 24/79 (30%), Positives = 30/79 (37%)
Frame = +1
Query: 49 AFTSRQRVQGRELFRHGIRLRKSRDDIQVRADIERQGNAHRAR*ASLFTRDIRNAPAVRY 228
++ R+R GR R R R R ++ N HR R RD +P
Sbjct: 1138 SYRDRRRFNGR---RSRSRSRSVSPQNYKRRKLDEHDNNHRQRSP---IRDRHTSP---- 1187
Query: 229 GGRATPSVRTRGNNIYPRL 285
GG TPS G Y RL
Sbjct: 1188 GGEKTPSSNNSGERNYKRL 1206
>AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical
protein Y108G3AL.3 protein.
Length = 685
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 112 KSRDDIQVRADIERQGNAHRAR*ASLFTRDIRNAPAVR 225
K DIQ A +ER A RAR + +D + A A+R
Sbjct: 634 KQMTDIQQNASLERPKTAARAR--EILDKDKKEAVAIR 669
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -3
Query: 264 PACTNRRRRAPPVPHSWRVSNVSRE*TGSPCTMSVTLTFDVSSHLYIIARLSQPNAVSK 88
P CT R + R S++ G+ SVTL + +S + I RL V K
Sbjct: 18 PRCTQTDVRQEQTKRTKRFSSLKTSQVGARSGQSVTLKWYISDYTSDIDRLETRKVVEK 76
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 139 LSLVYHRETFATECRVETALCLE 71
L L++ RE F+T R++ CLE
Sbjct: 380 LGLLFGRELFSTSRRIDLFFCLE 402
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>AF036704-1|AAB88560.2| 293|Caenorhabditis elegans Hypothetical
protein ZK185.3 protein.
Length = 293
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 134 TCISSRDFRNRMPCRNSSLP*TRCREVK 51
TC + R+ N +PC N LP T C E++
Sbjct: 124 TCCNIRENYN-VPCNNFYLPITVCPEIQ 150
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 TGGARRRRFVHAGITFTHGYLLQVLRK 307
TGG + R AG+ F G L ++LRK
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRK 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,049,024
Number of Sequences: 27780
Number of extensions: 124149
Number of successful extensions: 323
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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