Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18b06
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 122 3e-28
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 112 2e-25
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 111 5e-25
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 106 1e-23
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 89 4e-18
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 58 8e-09
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 51 7e-08
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 45 6e-05
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 31 0.59
05_05_0263 - 23673014-23673697,23673772-23674188 29 3.2
02_03_0343 + 17961977-17962596,17962670-17963015,17965933-179662... 29 4.2
07_03_0663 - 20451445-20452442,20452528-20452729 27 9.7
03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879... 27 9.7
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 122 bits (293), Expect = 3e-28
Identities = 62/148 (41%), Positives = 85/148 (57%)
Frame = +1
Query: 199 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 378
++ YT L I+ ++V S+ GKTF T +P G++IA V F G P
Sbjct: 65 QVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDEG-P 123
Query: 379 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 558
W M A ER ++ + ADLIE+ +A+LET DNGKPY + ++ + +RYYAGW
Sbjct: 124 WPKMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYAGW 183
Query: 559 ADKIHGNVLPADGKYFAYXRHEPVGVCG 642
ADKIHG V+PADG + HEP+GV G
Sbjct: 184 ADKIHGLVVPADGPHHVQVLHEPIGVAG 211
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 112 bits (270), Expect = 2e-25
Identities = 59/148 (39%), Positives = 80/148 (54%)
Frame = +1
Query: 199 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 378
++ YT L IN +V ++ GKTF T +P G VIA V F G P
Sbjct: 69 DVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDEG-P 127
Query: 379 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 558
W M A ER ++ + ADLIE+ +A+LET D GK + + ++ + +RYY GW
Sbjct: 128 WPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGGW 187
Query: 559 ADKIHGNVLPADGKYFAYXRHEPVGVCG 642
ADKIHG V+PADG + HEP+GV G
Sbjct: 188 ADKIHGLVVPADGPHHVQVLHEPIGVAG 215
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 111 bits (267), Expect = 5e-25
Identities = 61/148 (41%), Positives = 80/148 (54%)
Frame = +1
Query: 199 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 378
EI +T LFIN E+V ++ GKTFKT +P G V+A + F+ G
Sbjct: 23 EIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFEHGK- 81
Query: 379 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 558
W M ER ++NKLADL+E+ LA+L+ D GK D+ A+ + +RYYAG
Sbjct: 82 WPRMSGYERSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGA 141
Query: 559 ADKIHGNVLPADGKYFAYXRHEPVGVCG 642
ADKIHG L GKY Y EP+GV G
Sbjct: 142 ADKIHGESLRVAGKYQGYTLREPIGVVG 169
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 106 bits (255), Expect = 1e-23
Identities = 60/148 (40%), Positives = 78/148 (52%)
Frame = +1
Query: 199 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 378
EI YT LFIN +V ++ GKTF+T +P G VIA V F G
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFDHGE- 100
Query: 379 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 558
W M SERG ++ K A+++ER LA+LE+LD GKP + D+ + LRY+AG
Sbjct: 101 WPRMSGSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGA 160
Query: 559 ADKIHGNVLPADGKYFAYXRHEPVGVCG 642
ADKIHG L + Y EP+GV G
Sbjct: 161 ADKIHGETLKMSRQLQGYTLREPLGVAG 188
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 88.6 bits (210), Expect = 4e-18
Identities = 49/130 (37%), Positives = 65/130 (50%)
Frame = +1
Query: 253 GKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLAD 432
GKTF+T +P G+VIA++ F G PW M RG +++K AD
Sbjct: 33 GKTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFDHG-PWPRMSGFARGRILHKFAD 91
Query: 433 LIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPADGKYFAY 612
L+E+ LA+L+T+D GK + D+ LRYYAG ADK+HG L Y
Sbjct: 92 LVEQHVEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLKMARPCHGY 151
Query: 613 XRHEPVGVCG 642
EPVGV G
Sbjct: 152 TLKEPVGVVG 161
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 57.6 bits (133), Expect = 8e-09
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Frame = +1
Query: 214 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKL--GSPWRT 387
GLFI W + S G+ NPA I ++ F G W
Sbjct: 11 GLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSR 70
Query: 388 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADK 567
+ R + +A I+ ++YLA LETLD+GKP D GD+ YYA A+
Sbjct: 71 APGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPL-DEAAGDMEDVAACFEYYADLAEA 129
Query: 568 IHGN-----VLPADGKYFAYXRHEPVGVCG 642
+ G LP + + +Y EP+GV G
Sbjct: 130 LDGKQRAPISLPME-NFESYVLKEPIGVVG 158
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 50.8 bits (116), Expect(2) = 7e-08
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Frame = +1
Query: 262 FKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLADLIE 441
+ +NPA G+ +A V F W + A+ER + K DLI
Sbjct: 99 YLVQNPATGETLANVSCMGSKETSDAIASAHSTFY---SWSKLTANERSKALRKWHDLII 155
Query: 442 RDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLP---ADGKYFAY 612
+ LA L TL+ GKP K++ Y + + Y+A A +I+G+++P +D +
Sbjct: 156 SHKEELALLMTLEQGKPMKEALVEVTYGA-SFIEYFAEEAKRIYGDIIPPTLSDRRLLVL 214
Query: 613 XRHEPVGVCG 642
+PVGV G
Sbjct: 215 --KQPVGVVG 222
Score = 23.4 bits (48), Expect(2) = 7e-08
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 202 ILYTGLFINNEWVKSSDGKTFKTEN 276
+L T I +WV + DGKT + N
Sbjct: 51 LLRTQGLIGGKWVDAYDGKTIEVVN 75
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 44.8 bits (101), Expect = 6e-05
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 7/149 (4%)
Frame = +1
Query: 217 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKL--GSPWRTM 390
LF+ EW + G+ NPA I E+ K G W
Sbjct: 10 LFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGRDWARA 69
Query: 391 DASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI 570
+ R + +A I ++ LA LETLD GKP ++ + D+ Y+A A+ +
Sbjct: 70 PGAVRAKYLRAIAAKIIERKSELARLETLDCGKPLDEAAW-DMDDVAGCFEYFADLAESL 128
Query: 571 HGN-----VLPADGKYFAYXRHEPVGVCG 642
LP + + Y R EP+GV G
Sbjct: 129 DKRQNAPVSLPME-NFKCYLRKEPIGVVG 156
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 421 KLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKN 537
K+ L R YLASL + D+ P KD F ++YA+ N
Sbjct: 287 KIYRLRNPSRKYLASLSSYDSSNPTKDWGFPNIYANSDN 325
>05_05_0263 - 23673014-23673697,23673772-23674188
Length = 366
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 367 LGSPWRTMDASERGALINKLADLIERDR 450
+ SPWR +DA G ++ +L L++R R
Sbjct: 1 MDSPWRDLDADVLGFILKRLPCLVDRRR 28
>02_03_0343 +
17961977-17962596,17962670-17963015,17965933-17966291,
17966384-17966636
Length = 525
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 543 VLRRVGRQDPRECPARRRKILCLXS 617
VL V RQDP ECP + LC+ S
Sbjct: 300 VLLSVQRQDPEECPDQLISSLCISS 324
>07_03_0663 - 20451445-20452442,20452528-20452729
Length = 399
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 508 FGDLYASIKNLRYYAGWADKIHGNVLPADGKYFAYXRH 621
+ DLY + N + AG+ DK+ + A G + H
Sbjct: 44 YADLYCRVTNSEHVAGFKDKLDALCVSASGSEKRFFHH 81
>03_05_0223 -
22087076-22087340,22087448-22087726,22087808-22087950,
22088029-22088133,22088272-22088465,22088561-22088753,
22088893-22089202,22089335-22089558,22089862-22089990,
22090019-22090078,22090426-22090617,22091463-22091522,
22091606-22091688,22092473-22092611,22092949-22093083,
22093187-22093462
Length = 928
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 475 LDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 573
LD+ KP GD +++ + R GW D+I+
Sbjct: 388 LDSSKPISGDDLGDSFSTDEPARKEKGWVDEIY 420
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,197,126
Number of Sequences: 37544
Number of extensions: 354907
Number of successful extensions: 942
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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