Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18b02
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 229 2e-60
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 209 2e-54
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 68 6e-12
09_06_0271 + 21959213-21960559 51 9e-07
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 42 4e-04
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 38 0.007
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 37 0.012
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 37 0.016
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 31 0.78
05_04_0077 - 17712043-17712246,17712487-17712522,17712746-177129... 31 1.0
03_04_0180 + 18173005-18173976,18174066-18174170 30 1.8
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 29 4.2
07_03_1086 + 23858419-23859423,23859527-23859610 28 5.5
12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525 28 7.3
10_08_0986 + 22050631-22051224,22051493-22051703,22051791-220520... 28 7.3
06_01_0058 + 509121-509152,509284-509425,509501-509542,509791-50... 28 7.3
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 28 7.3
02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450,553... 28 7.3
12_01_0468 + 3661177-3661626 27 9.7
08_02_1333 + 26215545-26215759,26217315-26217372,26218263-262183... 27 9.7
08_02_0284 - 15305062-15305170,15305299-15305460,15306348-153064... 27 9.7
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 27 9.7
02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732 27 9.7
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 229 bits (559), Expect = 2e-60
Identities = 113/170 (66%), Positives = 140/170 (82%), Gaps = 15/170 (8%)
Frame = +2
Query: 179 YEPPI-PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE 355
+EPP P+RVG+K+RK KGP+AA +LP V P ++CRL+LLKLER+KDYLLMEEEF+ QE
Sbjct: 32 FEPPAAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLLKLERVKDYLLMEEEFVAAQE 91
Query: 356 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ 535
RL+P E+K EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKDQ
Sbjct: 92 RLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQ 151
Query: 536 LEPGCSVLLNHK--------------VHAVVGVLGDDTDPMVSVMKLEKA 643
LEPGCS+L+++K V +VVG+L D+ DPMVSVMK+EKA
Sbjct: 152 LEPGCSILMHNKMAVRCQCLYKAAFQVLSVVGILQDEVDPMVSVMKVEKA 201
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 209 bits (510), Expect = 2e-54
Identities = 95/132 (71%), Positives = 120/132 (90%), Gaps = 1/132 (0%)
Frame = +2
Query: 179 YEPPI-PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE 355
+EPP P+RVG+K+RK KGP+AA +LP V P ++CRL+LLKLER+KDYLLMEEEF+ +QE
Sbjct: 34 FEPPAAPSRVGRKQRKQKGPEAAARLPAVAPLSKCRLRLLKLERVKDYLLMEEEFVVSQE 93
Query: 356 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ 535
RL+P E+K EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKDQ
Sbjct: 94 RLRPSEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQ 153
Query: 536 LEPGCSVLLNHK 571
LEPGC++L+++K
Sbjct: 154 LEPGCAILMHNK 165
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/106 (30%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +2
Query: 314 DYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVG 490
+++ ++EE+++++++ LK + + +EE V ++ P+ +G E++D N+ IV ++ G
Sbjct: 2 EFVEIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDGNNGIVGSTTG 58
Query: 491 SEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVM 628
S +YV ILS ++++ L+P SV L+ +A+V VL + D +S++
Sbjct: 59 SNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLL 104
>09_06_0271 + 21959213-21960559
Length = 448
Score = 50.8 bits (116), Expect = 9e-07
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Frame = +2
Query: 281 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRG-TPMSVGNLEEIID 457
R KL LER ++ L++E+ ++ EE + V L TP+ V L+E++D
Sbjct: 60 REKLESLER--EFCLLDEQRDNALFQIHVLEETVRFREELVRRLTAVTPLVVAQLDEVVD 117
Query: 458 DNHAIVSTSVGSEH--YVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDD 604
++HA+V+ G E V + +D+ L+P +V LN + A+VGV D
Sbjct: 118 EHHAVVTLGDGCERKMCVGVAGSLDRGLLKPSANVALNGRSLALVGVPPSD 168
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 41.9 bits (94), Expect = 4e-04
Identities = 35/132 (26%), Positives = 59/132 (44%)
Frame = +2
Query: 224 AKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 403
A G DAA + + T R KLL ++ + E ++N K K E++ +
Sbjct: 2 ADGEDAAAARRRASV-TEYRKKLLNCRELESRVSTVRENLKNA---KKDFTKTEDD---L 54
Query: 404 DDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAV 583
L+ +G + +D+ IV S G + V S VDK++L G V+L+ +
Sbjct: 55 KSLQSVGQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTI 114
Query: 584 VGVLGDDTDPMV 619
+ L + DP+V
Sbjct: 115 MRTLPREVDPVV 126
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +2
Query: 350 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 529
++ LK ++ + + L+ +G + +D IV S G + V S VDK
Sbjct: 38 RDNLKNAKKDFGKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 97
Query: 530 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 619
++L G V+L+ ++ L + DP+V
Sbjct: 98 EKLIAGTRVVLDMTTLTIMRTLPREVDPVV 127
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 37.1 bits (82), Expect = 0.012
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Frame = +2
Query: 326 MEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNH------------- 466
+ +E R L+ +EKI+E + K+ + P VGN+ EI++ N
Sbjct: 30 IRDELQRTNLELESFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDL 89
Query: 467 --------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 622
++ TS ++ ++ VD D+L+PG V +N + ++ L + D V
Sbjct: 90 DSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 149
Query: 623 VMKLEK 640
M++++
Sbjct: 150 AMEVDE 155
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/127 (21%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Frame = +2
Query: 323 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNH------------ 466
++++E R ++ +EKI+E + K+ + P VGN+ EI++ N
Sbjct: 32 VLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 91
Query: 467 ---------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 619
++ TS ++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 92 LDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
Query: 620 SVMKLEK 640
M++++
Sbjct: 152 KAMEVDE 158
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 314 DYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLR 415
++L M+EE I+ +E+ K +EEK ++E+ + L+
Sbjct: 532 EFLEMQEELIKEEEKKKEKEEKAKQEKEEKAKLK 565
>05_04_0077 - 17712043-17712246,17712487-17712522,17712746-17712900,
17713431-17713591,17713950-17714110,17714188-17715657,
17715704-17715998,17716461-17717737,17717826-17718137,
17718223-17718356,17718449-17718521,17719994-17720059,
17720748-17720936
Length = 1510
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 440 LEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVL---LNHKVHAVVGVL 595
L+++ D N+A T + S LS ++KDQ + G ++L LN H V G+L
Sbjct: 1441 LDKVEDTNYAFEGTRKSQSAFFSYLSGIEKDQAD-GIALLTEVLNFSFHNVKGLL 1494
>03_04_0180 + 18173005-18173976,18174066-18174170
Length = 358
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 374 EKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCS 553
E++E S +DDLR M + L + DN + + V++LS D E G +
Sbjct: 56 EELESPASSLDDLRRAAMELRLLAKHSPDNRLRIVAAGALPPLVALLSRPDPLLQEHGVT 115
Query: 554 VLLN 565
LLN
Sbjct: 116 ALLN 119
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +2
Query: 290 LLKLERIKDYLLMEEEFIRNQERLKPQE--EKIEEERSKVDD 409
L+++E+ K+ L+E + +ER + +E +K+EEER K ++
Sbjct: 97 LVQIEKEKEAALVEAQHKAERERKEREELEKKLEEERKKAEE 138
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 377 KIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSV 556
++E S +D LR M + L + DN ++ + V++LS D E G +
Sbjct: 69 ELESPSSSLDSLRRAAMELRLLAKHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTA 128
Query: 557 LLN 565
LLN
Sbjct: 129 LLN 131
>12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525
Length = 212
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 260 VTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 412
+TP KLER K L E + + ++ + + EE+SK+D L
Sbjct: 116 ITPAVYLEQHQFKLERAKQRLADRRERMDIEATIQANRQLVYEEKSKLDQL 166
>10_08_0986 +
22050631-22051224,22051493-22051703,22051791-22052082,
22052415-22052780,22052878-22052955,22053099-22053327
Length = 589
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 401 VDDLRGT-PMSVGNLEEIIDDNHAIVSTSVG-SEHYVSILSFVDKDQLEPGCSVLLNHKV 574
+D+L P + G + +D + S + V +SF +D E L V
Sbjct: 175 IDELASVIPFTDGTIRTALDTGCGVASWGAYLMDRNVLTMSFAPRDSHEAQVQFALERGV 234
Query: 575 HAVVGVLG 598
AV+GVLG
Sbjct: 235 PAVIGVLG 242
>06_01_0058 +
509121-509152,509284-509425,509501-509542,509791-509832,
510043-510150
Length = 121
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 120 VKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGKLRDQMRLSSFRK 260
++I+ VE T+KM S SL+ LH L + K +RL K
Sbjct: 1 MEIDTVEAYTRKMQGENLESCSLQELHGLEMQMEKSLSSIRLQKASK 47
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 260 VTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 427
+TP KLE+ K L+ E + ++ + + EE+SK+D L P+
Sbjct: 168 LTPAAYFEQHQFKLEKAKQRLVERRERKEIEATIQANRQLVHEEKSKLDQLSEGPI 223
>02_01_0743 -
5530184-5531078,5531160-5531405,5531815-5532450,
5534499-5534607,5536157-5536321,5536446-5536543,
5536648-5536898
Length = 799
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 428 TLEFLLGHQP*TFLLQFSLPVASSVLDYG*TPLPSTNSLLFFR 300
TL FLL + TF ++F + AS +DY L TN F R
Sbjct: 744 TLPFLLKGEKKTFQVRFEVTNASLAMDYSFGALVWTNGKQFVR 786
>12_01_0468 + 3661177-3661626
Length = 149
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 329 EEEFIRNQERLKPQEEKIEEERSKVDD 409
EEE I +E ++ +EE+IEEE K ++
Sbjct: 76 EEEDIEEEEVVEEEEEEIEEEEVKEEE 102
>08_02_1333 +
26215545-26215759,26217315-26217372,26218263-26218342,
26218606-26218639,26218756-26218896
Length = 175
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 EWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGK 224
EW+ + + + TRRR M ++H+ V KGK
Sbjct: 53 EWLLLLCIHWIASPSKGTRRRYMHQANMHKYVDNKGK 89
>08_02_0284 -
15305062-15305170,15305299-15305460,15306348-15306485,
15306741-15306754
Length = 140
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 203 VGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLL-MEEEFIRNQER 358
VG++ R+ +G A PQ + T ++ L E +Y+L ++ +F+R+ E+
Sbjct: 38 VGEEWRRREGEAARSIKPQTSMRTSVKVHKLTTEDAMNYILTIKNKFLRHPEK 90
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 236 DAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVD 406
DA++ +V L+L L +EE+F ++QE L+ + ++ E R K+D
Sbjct: 589 DASISSSKVLQEKCADLELKLLNFRSQIYELEEKFQKSQEELEQRNLELSELRQKLD 645
>02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732
Length = 1050
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 431 LTLEFLLGHQP*TFLLQFSLPVASSVL 351
L E +GH P FLL FS+ S+ L
Sbjct: 954 LVFELFMGHHPGDFLLSFSMAKESTTL 980
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,428,378
Number of Sequences: 37544
Number of extensions: 250459
Number of successful extensions: 852
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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