Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18a22
         (587 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D13645-1|BAA02808.1|  508|Homo sapiens KIAA0020 protein.               43   0.001
CR456957-1|CAG33238.1|  508|Homo sapiens KIAA0020 protein.             43   0.001
BC016137-1|AAH16137.2|  648|Homo sapiens KIAA0020 protein.             43   0.001
AL589675-1|CAI12924.2|  684|Homo sapiens KIAA0020 protein.             43   0.001
AL354723-1|CAI15123.2|  684|Homo sapiens KIAA0020 protein.             43   0.001
AF490254-1|AAO85462.1|  508|Homo sapiens XTP5 protein.                 43   0.001

>D13645-1|BAA02808.1|  508|Homo sapiens KIAA0020 protein.
          Length = 508

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/58 (31%), Positives = 36/58 (62%)
 Frame = -1

Query: 179 QTILKVVKEHAIPLSKHKTGYRLLIAIFDSVDDTVLVKKTIVSTLAANIKDIAKDHWG 6
           + I+K +K +   ++  +  + +L+A FD +DDT LVK+ I+S + +++  I  D +G
Sbjct: 241 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYG 298


>CR456957-1|CAG33238.1|  508|Homo sapiens KIAA0020 protein.
          Length = 508

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/58 (31%), Positives = 36/58 (62%)
 Frame = -1

Query: 179 QTILKVVKEHAIPLSKHKTGYRLLIAIFDSVDDTVLVKKTIVSTLAANIKDIAKDHWG 6
           + I+K +K +   ++  +  + +L+A FD +DDT LVK+ I+S + +++  I  D +G
Sbjct: 241 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYG 298


>BC016137-1|AAH16137.2|  648|Homo sapiens KIAA0020 protein.
          Length = 648

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/58 (31%), Positives = 36/58 (62%)
 Frame = -1

Query: 179 QTILKVVKEHAIPLSKHKTGYRLLIAIFDSVDDTVLVKKTIVSTLAANIKDIAKDHWG 6
           + I+K +K +   ++  +  + +L+A FD +DDT LVK+ I+S + +++  I  D +G
Sbjct: 381 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYG 438


>AL589675-1|CAI12924.2|  684|Homo sapiens KIAA0020 protein.
          Length = 684

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/58 (31%), Positives = 36/58 (62%)
 Frame = -1

Query: 179 QTILKVVKEHAIPLSKHKTGYRLLIAIFDSVDDTVLVKKTIVSTLAANIKDIAKDHWG 6
           + I+K +K +   ++  +  + +L+A FD +DDT LVK+ I+S + +++  I  D +G
Sbjct: 417 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYG 474


>AL354723-1|CAI15123.2|  684|Homo sapiens KIAA0020 protein.
          Length = 684

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/58 (31%), Positives = 36/58 (62%)
 Frame = -1

Query: 179 QTILKVVKEHAIPLSKHKTGYRLLIAIFDSVDDTVLVKKTIVSTLAANIKDIAKDHWG 6
           + I+K +K +   ++  +  + +L+A FD +DDT LVK+ I+S + +++  I  D +G
Sbjct: 417 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYG 474


>AF490254-1|AAO85462.1|  508|Homo sapiens XTP5 protein.
          Length = 508

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/58 (31%), Positives = 36/58 (62%)
 Frame = -1

Query: 179 QTILKVVKEHAIPLSKHKTGYRLLIAIFDSVDDTVLVKKTIVSTLAANIKDIAKDHWG 6
           + I+K +K +   ++  +  + +L+A FD +DDT LVK+ I+S + +++  I  D +G
Sbjct: 241 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYG 298


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,185,805
Number of Sequences: 237096
Number of extensions: 1399112
Number of successful extensions: 9970
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9970
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)