Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18a21
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   2.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   8.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   8.0  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 326 EKLTKLITHEIKEVVYPFGDITDPVTGKKVSK 421
           E+ TKL + ++  +V    DIT+  + KK SK
Sbjct: 86  ERTTKLDSEQVNRLVNNCKDITESNSCKKSSK 117


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 155 LGQCVPTVKQNAA 193
           LG C P VKQ AA
Sbjct: 13  LGVCAPNVKQRAA 25


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 100 FLMIRFAVFLYFENI 56
           F++I + +FLYF ++
Sbjct: 16  FILINYFIFLYFNSL 30


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 407 KKVSKEQYKEDIERQTELYGRLKSTFNYNKAPPRGWQDGKKDFTSK 544
           ++ S+++Y    ER+ + Y   +    Y +      QD  +  TSK
Sbjct: 32  ERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRTERETSK 77


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 407 KKVSKEQYKEDIERQTELYGRLKSTFNYNKAPPRGWQDGKKDFTSK 544
           ++ S+++Y    ER+ + Y   +    Y +      QD  +  TSK
Sbjct: 32  ERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRTERETSK 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,523
Number of Sequences: 438
Number of extensions: 4358
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)