Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18a10
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 256 3e-69
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 214 8e-57
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 200 2e-52
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 152 5e-38
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 142 4e-35
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 132 6e-32
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 132 6e-32
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 124 8e-30
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 117 2e-27
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 92 5e-20
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 88 9e-19
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 82 6e-17
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 75 7e-15
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 75 7e-15
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 74 2e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 69 8e-13
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 66 5e-12
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 65 1e-11
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 62 9e-11
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 60 4e-10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 57 3e-09
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 38 0.001
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 29 0.76
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.76
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 27 2.3
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.1
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 4.1
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 26 5.4
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 26 5.4
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 7.1
SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.4
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 256 bits (626), Expect = 3e-69
Identities = 117/180 (65%), Positives = 152/180 (84%)
Frame = +1
Query: 31 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 210
K+YD L KLLLIGDSGVGK+ +L RFSED+F SFI+TIGIDFKIRTI+LDGK++KLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 211 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 390
DTAGQERFRTITTAYYRG+MGI+L+YDVT++KSF+N++ W N+E++AS +V K+++GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 391 CDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKEASN 570
CD + QRQVS E+G+ LA E +KF+E SAK ++NV+ AF+TLAR+IK + + E SN
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSN 183
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 214 bits (523), Expect = 8e-57
Identities = 100/182 (54%), Positives = 134/182 (73%)
Frame = +1
Query: 25 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 204
M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRT +L+GK VKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 205 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 384
IWDTAGQERFRTIT++YYRG+ GI++VYDVT++ SF N+K W++ I+ A V ++++G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
Query: 385 NKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKEA 564
NK D+ ++ V ++ A I F+ETSAKDS NVE AF T++R IK +M +
Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180
Query: 565 SN 570
SN
Sbjct: 181 SN 182
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 200 bits (487), Expect = 2e-52
Identities = 95/200 (47%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
Frame = +1
Query: 37 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 216
YD LFK +LIGDSGVGK+++L RF+ + FNI STIG++F R I LD KK+K QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 217 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 396
AGQER+R IT+AYYRG++G ++VYD+T + SF+N+ W++ + E+A +++ M++GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 397 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKEAS--- 567
L R VS E + A E + F+ETSA D+ NVE AF T+ +I + + EA
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186
Query: 568 -NPSGGRSGVHKPTLNDARK 624
+P+ G++ PT+ND K
Sbjct: 187 VHPTAGQTLNIAPTMNDLNK 206
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 152 bits (368), Expect = 5e-38
Identities = 72/159 (45%), Positives = 108/159 (67%)
Frame = +1
Query: 49 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 228
FKL+ +G+ VGKTS++ RF D F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 229 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 408
RFR++ +Y R S ++VYD+TN SF N + WI ++ DV +++GNK DL +
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 409 RQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLAR 525
RQV++E GE+ A E +I +ETSAK NV+ F +A+
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQ 170
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 142 bits (344), Expect = 4e-35
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 5/189 (2%)
Frame = +1
Query: 31 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL----DGKKVK 198
++YD L K++L G SG GK+ +L RF ++ ++ T+GIDF R I + K++K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 199 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMI 378
LQIWDTAGQE+FR++ YYRG+ G +LVYDVTN+ SFE + +W+ +I A + + ++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVL 123
Query: 379 LGNKCDLDSQRQVSKERGEQLAIEYQIKFV-ETSAKDSLNVEYAFYTLARDIKAKMEKKQ 555
G+K DL +QRQVS E + E I ETS+ NVE F ++ I ++E +
Sbjct: 124 AGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIELGE 183
Query: 556 KEASNPSGG 582
+ + S G
Sbjct: 184 IDPQDQSLG 192
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 132 bits (318), Expect = 6e-32
Identities = 71/173 (41%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQE 228
KL+L+GDS VGK+S++ RF +D F+ STIG F +T+ +D VKL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 229 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 408
R++++ YYR + ++VYD+T S E K+WI+ ++ A + + GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 409 RQ-VSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKEA 564
R+ V K E A E + F ETSAK + NV F +A+ K +E K +A
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAK--KLPLEDKLNQA 186
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 132 bits (318), Expect = 6e-32
Identities = 70/166 (42%), Positives = 107/166 (64%), Gaps = 6/166 (3%)
Frame = +1
Query: 46 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 225
L K++++G+SGVGKTSI+ ++ F+ + +TIG DF + + +D K V LQ+WDTAGQ
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67
Query: 226 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK----MILGNKC 393
ERF+++ A+YRG+ +LVYDV N KSFE + +W AS + ++LGNK
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 394 DLDSQ-RQVSKERGEQLA-IEYQIKFVETSAKDSLNVEYAFYTLAR 525
D++ Q R VSK + +I + ETSAK+++NV+ AF T+A+
Sbjct: 128 DVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 124 bits (300), Expect = 8e-30
Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 1/183 (0%)
Frame = +1
Query: 25 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 204
M TY +KL+++GD GVGK+++ + + F + TI ++ + ++DG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLD 59
Query: 205 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL- 381
+ DTAGQE + + Y R G +LVY++T+ SF+ I + + I D ++L
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 382 GNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKE 561
NKCDL+++R VS+ GEQLA +VETSAK LNVE AFY+L R I+ + ++K
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKG 179
Query: 562 ASN 570
N
Sbjct: 180 FQN 182
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 117 bits (281), Expect = 2e-27
Identities = 64/165 (38%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
K++++GDSGVGKT ++ +F F+ + +TIG DF + + +D K V LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLD 402
F+++ A+YRG+ ++VY+V N KSF++++NW + S D +I+GN+ D D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 403 -SQRQVSKERG-EQLAIEYQIKFV--ETSAKDSLNVEYAFYTLAR 525
S+R VS R + ++ + E SAK++ NV F T++R
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 92.3 bits (219), Expect = 5e-20
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 1/182 (0%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
++ ++G VGK+S+ ++ E+ F S+ TI F + I G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDLDSQ 408
+ + + + G G +LVY +T++ SFE +K I + + V +++GNK DL Q
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 409 RQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKEASNPSGGRS 588
R V+ E G+ LA E++ + E SA+ + NV AF + +I +KQ S P G+
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI-----EKQANPSPPGDGKG 181
Query: 589 GV 594
V
Sbjct: 182 CV 183
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 88.2 bits (209), Expect = 9e-19
Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +1
Query: 49 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 228
FKL+L+GD G GKT+ + R F +I+T+G++ + ++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 229 RFRTITTAYY-RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDS 405
+ + YY +G GI +++DVT+ +++N+ +W R++ ++ ++ GNK D+
Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDV-K 126
Query: 406 QRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI 531
+R+V K + + +++ + SAK + N E F LAR +
Sbjct: 127 ERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 82.2 bits (194), Expect = 6e-17
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 10/187 (5%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
K++++GD GKTS+L F++ F + TI ++ I I +DG ++L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFEN-IKNWIRNIEENASADVEKMILGNKCDL--- 399
+ + + Y + IM+ + V + S EN I W+ + N V+ +++ KCDL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPG-VKLVLVALKCDLRGA 132
Query: 400 -----DSQRQVSKERGEQLAIEYQ-IKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQKE 561
D + + E G A + ++++E SAK + V AF AR A + K+
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPRGTKD 192
Query: 562 ASNPSGG 582
++ S G
Sbjct: 193 GADESHG 199
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 75.4 bits (177), Expect = 7e-15
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ V+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--- 399
+ + Y S I++ + V + S +N+ + WI + S+ + +++ K DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSS-LPILLVACKADLRND 125
Query: 400 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 549
+Q V+ E G+ +A + K++E SAK + V F + R K +
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKP 185
Query: 550 KQKEAS 567
K K +S
Sbjct: 186 KVKPSS 191
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 75.4 bits (177), Expect = 7e-15
Identities = 49/172 (28%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--- 399
+ + Y S +++ + V +S +N+ + WI + S ++ +++G K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-NLPILLVGCKVDLRND 125
Query: 400 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLAR 525
SQ+ ++ E G+ +A + K++E SAK + V F T AR
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 73.7 bits (173), Expect = 2e-14
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Frame = +1
Query: 28 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 207
A+ + K+ +IGDS +GKTS++ + + +F+ T+G++F +TI + ++ I
Sbjct: 4 ARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSI 63
Query: 208 WDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGN 387
WD GQ F + ++ I+ ++D++ + + +IK W R + +++G
Sbjct: 64 WDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ-ARGFNKTAVPILIGT 122
Query: 388 KCD------LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 510
K D + Q +++K+ + A + V S S+NV+ F
Sbjct: 123 KYDHFMTFPREDQEEITKQ-ARRYAKAMKASLVFCSTSHSINVQKIF 168
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 68.5 bits (160), Expect = 8e-13
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
KL+++GD GKTS+L F+ F ++ T+ ++ + +DGK V+L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDLDS 405
+ + Y + I++ + + + S EN+ WI I +V +++G K DL S
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEI-NTLCPNVPFILVGMKADLRS 126
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 65.7 bits (153), Expect = 5e-12
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDL--- 399
+ + Y + ++ + VT+ SFEN+K W + + V +I+G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQIDLRDD 122
Query: 400 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAF 510
Q ++ E+GE+LA E +K+VE SA ++ F
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 64.9 bits (151), Expect = 1e-11
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQE 228
KL+++GD G GKT +L FS F ++ T+ ++ T + K ++L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 229 RFRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDS 405
+ + Y S I+L + + S N+ + W + ++ +++G K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLRK 134
Query: 406 QRQ------------VSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 510
R V+ ++ + +A+ +VE SAK++ V F
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 61.7 bits (143), Expect = 9e-11
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Frame = +1
Query: 16 VVKMAKTYDCLFKLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKK 192
+++ K + ++LL+G GKT+IL +ED +S T G F+IRT++++G
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVS--PTFG--FQIRTLEVEG-- 59
Query: 193 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRN-IEENASADVE 369
++ IWD GQ+ R Y+ + I+ V D ++ E +N ++ + E
Sbjct: 60 LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTS 119
Query: 370 KMILGNKCDLD---SQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIK 534
++L NK D+ S ++SK + SA LN++ A LA D+K
Sbjct: 120 ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDLK 177
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 59.7 bits (138), Expect = 4e-10
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
++L++G GKT+IL++ N S ++ + F + T+ K +K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWI-RNIEENASADVEKMILGNKCDL 399
R + Y+ G+ G++ V D + + + R I + D ++L NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 56.8 bits (131), Expect = 3e-09
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
++L++G GKT+IL++ ++ I TIG F + T++ + + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--RNISFTVWDVGGQDK 73
Query: 232 FRTITTAYYRGSMGIMLVYDVTN-EKSFENIKNWIRNIEENASADVEKMILGNKCDL 399
R + Y++ + GI+ V D + E+ E + R + E+ D ++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 38.3 bits (85), Expect = 0.001
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 231
++++ GD GVGK+S++ ++ N++ I + I + V L + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQED-NVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 232 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC-DLDSQ 408
R A + + I LVY ++ S+E + + + +V ++ NK DLD+
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDNY 121
Query: 409 RQVSKERGEQLAIEYQIKFVET----SAKDSLNVEYAFY 513
+ + E + + + K +E SA + +NV FY
Sbjct: 122 QGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFY 160
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 0.76
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 64 IGDSGVGKTSILFRFSEDAFNISFISTIGIDFKI 165
IGD V ++LFRF + +F + I +GID I
Sbjct: 423 IGDMVVFSKNVLFRFIQLSFYVGMIVILGIDLFI 456
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 28.7 bits (61), Expect = 0.76
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Frame = +1
Query: 52 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 228
K+LL+G SG GK+S+ FS + ID + + G V L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 229 RF-RTITTA----YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD 363
F +A +R ++ V+DV + FE RN E A+
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDV-ESREFERDLVTFRNCLEATVAN 111
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +1
Query: 271 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 384
GI L+ + E ++ +++ I+ENA + V +++LG
Sbjct: 947 GINLITSLIKEYGKNSVLRYMKAIQENAESAVRQLLLG 984
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 551 FFSIFAFMSLAKV*NAYSTF-NESFADVSTNF 459
FFS ++LA + YS F N SF D T+F
Sbjct: 11 FFSFERLLTLANANSLYSPFNNSSFVDSDTSF 42
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 276 NSHRTTVVCCCYCTESLLTSS 214
+SH+T++VC Y E LL S
Sbjct: 1331 DSHKTSIVCILYLLEVLLADS 1351
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1
Query: 49 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 228
F L+L G+SG+GKT+ F F+ + S +G + K+R + K V+++I +E
Sbjct: 29 FTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82
Query: 229 R 231
+
Sbjct: 83 K 83
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 116 SSENLNSIDVFPTPESPIRSNLNKQS 39
SSE +S+DV PTP + NL S
Sbjct: 617 SSEPTSSVDVAPTPVEDVNVNLESIS 642
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 187 KKVKLQIWDTAGQERFRTITTAYYRGSMGI-MLVYDVTNEKSFENIKNWIRNIEENAS 357
K ++L I D R T+T G++ + ++YDV++++ +KN IRN + +++
Sbjct: 403 KPLRLSIDDVYRSPRSVTVTGRVEAGNVQVNQVLYDVSSQED-AYVKNVIRNSDPSST 459
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 559 EASNPSGGRSGVHKPT 606
+ASNP+G S H+PT
Sbjct: 553 QASNPNGSSSAPHRPT 568
>SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 25.0 bits (52), Expect = 9.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 7 NQIVVKMAKTYDCLFK 54
N +V+K K YDC+F+
Sbjct: 3 NPVVIKAKKDYDCVFE 18
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,618,002
Number of Sequences: 5004
Number of extensions: 53014
Number of successful extensions: 225
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -