Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17p19
(480 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063431-1|AAH63431.1| 301|Homo sapiens hepatitis A virus cellu... 29 6.4
BC036335-1|AAH36335.1| 1151|Homo sapiens BTBD12 protein protein. 29 6.4
BC029654-1|AAH29654.1| 251|Homo sapiens ZBTB8 protein protein. 29 6.4
BC015239-1|AAH15239.1| 441|Homo sapiens zinc finger and BTB dom... 29 6.4
BC015067-1|AAH15067.1| 236|Homo sapiens ZBTB8 protein protein. 29 6.4
AY069944-1|AAL55401.1| 301|Homo sapiens putative kidney injury ... 29 6.4
AL033529-4|CAI20024.1| 441|Homo sapiens zinc finger and BTB dom... 29 6.4
AK074546-1|BAC11050.1| 441|Homo sapiens protein ( Homo sapiens ... 29 6.4
AK027334-1|BAB55044.1| 301|Homo sapiens protein ( Homo sapiens ... 29 6.4
AF548353-1|AAN40800.1| 441|Homo sapiens BTB/POZ and zinc-finger... 29 6.4
AF450243-1|AAL65158.1| 301|Homo sapiens T cell immunoglobulin m... 29 6.4
AF450242-1|AAL65157.1| 301|Homo sapiens T cell immunoglobulin m... 29 6.4
AF251707-1|AAM19100.1| 301|Homo sapiens hepatitis A virus cellu... 29 6.4
AB058687-1|BAB47413.1| 1167|Homo sapiens KIAA1784 protein protein. 29 6.4
>BC063431-1|AAH63431.1| 301|Homo sapiens hepatitis A virus cellular
receptor 2 protein.
Length = 301
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 462 LSVGLVTLPGSC--LCLALVSSRRSLSWYSHLRNRLGSSSLVS 340
+ +G+ G C L LAL+ WYSH + ++ + SL+S
Sbjct: 199 IRIGIYIGAGICAGLALALIFGALIFKWYSHSKEKIQNLSLIS 241
>BC036335-1|AAH36335.1| 1151|Homo sapiens BTBD12 protein protein.
Length = 1151
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 134 PHTRAGRLESTTKLLDPNPGGHPNQDPRGDH 226
P T GR + P+PGGHP+ P H
Sbjct: 647 PGTSDGRRQGHRSPSRPHPGGHPHSSPLAPH 677
>BC029654-1|AAH29654.1| 251|Homo sapiens ZBTB8 protein protein.
Length = 251
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 148 RSCMRDVKSLTRLVVDDGVRRFRL 77
R C R V LT VV +G RR+RL
Sbjct: 151 RKCKRHVTDLTGQVVQEGTRRYRL 174
>BC015239-1|AAH15239.1| 441|Homo sapiens zinc finger and BTB domain
containing 8 protein.
Length = 441
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 148 RSCMRDVKSLTRLVVDDGVRRFRL 77
R C R V LT VV +G RR+RL
Sbjct: 341 RKCKRHVTDLTGQVVQEGTRRYRL 364
>BC015067-1|AAH15067.1| 236|Homo sapiens ZBTB8 protein protein.
Length = 236
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 148 RSCMRDVKSLTRLVVDDGVRRFRL 77
R C R V LT VV +G RR+RL
Sbjct: 136 RKCKRHVTDLTGQVVQEGTRRYRL 159
>AY069944-1|AAL55401.1| 301|Homo sapiens putative kidney injury
molecule-3 protein.
Length = 301
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 462 LSVGLVTLPGSC--LCLALVSSRRSLSWYSHLRNRLGSSSLVS 340
+ +G+ G C L LAL+ WYSH + ++ + SL+S
Sbjct: 199 IRIGIYIGAGICAGLALALIFGALIFKWYSHSKEKIQNLSLIS 241
>AL033529-4|CAI20024.1| 441|Homo sapiens zinc finger and BTB domain
containing 8 protein.
Length = 441
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 148 RSCMRDVKSLTRLVVDDGVRRFRL 77
R C R V LT VV +G RR+RL
Sbjct: 341 RKCKRHVTDLTGQVVQEGTRRYRL 364
>AK074546-1|BAC11050.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ90065 fis, clone HEMBA1003497, weakly similar to
ZINC FINGER PROTEIN 151. ).
Length = 441
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 148 RSCMRDVKSLTRLVVDDGVRRFRL 77
R C R V LT VV +G RR+RL
Sbjct: 341 RKCKRHVTDLTGQVVQEGTRRYRL 364
>AK027334-1|BAB55044.1| 301|Homo sapiens protein ( Homo sapiens
cDNA FLJ14428 fis, clone HEMBA1006293. ).
Length = 301
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 462 LSVGLVTLPGSC--LCLALVSSRRSLSWYSHLRNRLGSSSLVS 340
+ +G+ G C L LAL+ WYSH + ++ + SL+S
Sbjct: 199 IRIGIYIGAGICAGLALALIFGALIFKWYSHSKEKIQNLSLIS 241
>AF548353-1|AAN40800.1| 441|Homo sapiens BTB/POZ and zinc-finger
domains factor on chromosome 1 protein.
Length = 441
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 148 RSCMRDVKSLTRLVVDDGVRRFRL 77
R C R V LT VV +G RR+RL
Sbjct: 341 RKCKRHVTDLTGQVVQEGTRRYRL 364
>AF450243-1|AAL65158.1| 301|Homo sapiens T cell immunoglobulin
mucin-3 protein.
Length = 301
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 462 LSVGLVTLPGSC--LCLALVSSRRSLSWYSHLRNRLGSSSLVS 340
+ +G+ G C L LAL+ WYSH + ++ + SL+S
Sbjct: 199 IRIGIYIGAGICAGLALALIFGALIFKWYSHSKEKIQNLSLIS 241
>AF450242-1|AAL65157.1| 301|Homo sapiens T cell immunoglobulin
mucin-3 protein.
Length = 301
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 462 LSVGLVTLPGSC--LCLALVSSRRSLSWYSHLRNRLGSSSLVS 340
+ +G+ G C L LAL+ WYSH + ++ + SL+S
Sbjct: 199 IRIGIYIGAGICAGLALALIFGALIFKWYSHSKEKIQNLSLIS 241
>AF251707-1|AAM19100.1| 301|Homo sapiens hepatitis A virus cellular
receptor 2 protein.
Length = 301
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 462 LSVGLVTLPGSC--LCLALVSSRRSLSWYSHLRNRLGSSSLVS 340
+ +G+ G C L LAL+ WYSH + ++ + SL+S
Sbjct: 199 IRIGIYIGAGICAGLALALIFGALIFKWYSHSKEKIQNLSLIS 241
>AB058687-1|BAB47413.1| 1167|Homo sapiens KIAA1784 protein protein.
Length = 1167
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 134 PHTRAGRLESTTKLLDPNPGGHPNQDPRGDH 226
P T GR + P+PGGHP+ P H
Sbjct: 663 PGTSDGRRQGHRSPSRPHPGGHPHSSPLAPH 693
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,467,056
Number of Sequences: 237096
Number of extensions: 1577464
Number of successful extensions: 5610
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5599
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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