Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17p14
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   1.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.5  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       24   3.4  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       24   3.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.4  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 457 STACSTCSGVTITPTPQAFSNSS 389
           +T  +T S  T+ PTPQA S+++
Sbjct: 58  ATYANTVSAKTVAPTPQAASHTA 80


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 439  CSGVTITPTPQAFSNSS-IFTLASLILPRR*SNAASTRNVESSFPDA 302
            CS  T  P P A SNS+   ++A ++     S   S RN +   PDA
Sbjct: 1305 CSASTSEPAPAAPSNSTPSRSVARIVTSFTDSPLFSRRNRQPKAPDA 1351


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 456 EKHMVKYKQELLEKRYRFNSGIIMQAVRADLTW 554
           ++  V Y Q+ LE   R NS  + + V  D TW
Sbjct: 5   KQQRVDYSQQCLELFERNNSEFLRRYVTMDETW 37


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 456 EKHMVKYKQELLEKRYRFNSGIIMQAVRADLTW 554
           ++  V Y Q+ LE   R NS  + + V  D TW
Sbjct: 5   KQQRVDYSQQCLELFERNNSEFLRRYVTMDETW 37


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 339 AALDYLLGNINEANVNIEE 395
           AAL Y LGN++EA   +E+
Sbjct: 457 AALHYRLGNLDEAMSKLEQ 475


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,554
Number of Sequences: 2352
Number of extensions: 11561
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)