Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17o08
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118660-1|AAM50029.1|  518|Drosophila melanogaster SD09850p pro...    65   7e-11
AE013599-3921|AAF47244.2|  518|Drosophila melanogaster CG3608-PA...    65   7e-11
AE014134-583|AAN10389.1|  467|Drosophila melanogaster CG33281-PA...    28   9.6  

>AY118660-1|AAM50029.1|  518|Drosophila melanogaster SD09850p
           protein.
          Length = 518

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +2

Query: 320 LTRIIKYGFYG-GVAVGGCVTALKFHDGDYNSLAIVRITRTACTAVDIGRTYQSLLYSKD 496
           L R++ YG  G G+A  G   +L  +D D NSL IVR++R+A   VD+  TY+  LY K+
Sbjct: 3   LRRVLGYGVVGAGLASAGW--SLHTNDYDPNSLGIVRLSRSAAAVVDVALTYKRELYYKE 60

Query: 497 WDRSSPEYLEVKKQAHQ 547
           WD+ +PEY   K + H+
Sbjct: 61  WDKETPEYKAEKSRVHK 77


>AE013599-3921|AAF47244.2|  518|Drosophila melanogaster CG3608-PA
           protein.
          Length = 518

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +2

Query: 320 LTRIIKYGFYG-GVAVGGCVTALKFHDGDYNSLAIVRITRTACTAVDIGRTYQSLLYSKD 496
           L R++ YG  G G+A  G   +L  +D D NSL IVR++R+A   VD+  TY+  LY K+
Sbjct: 3   LRRVLGYGVVGAGLASAGW--SLHTNDYDPNSLGIVRLSRSAAAVVDVALTYKRELYYKE 60

Query: 497 WDRSSPEYLEVKKQAHQ 547
           WD+ +PEY   K + H+
Sbjct: 61  WDKETPEYKAEKSRVHK 77


>AE014134-583|AAN10389.1|  467|Drosophila melanogaster CG33281-PA
           protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 269 MSLK*LFSLLINMFSRKLTRIIKYGFYGGVAVGGCVTALKFH 394
           M+L  L   +I  F+R    +I   F GG A GGC T +  +
Sbjct: 89  MALPNLLGWVIIPFARTPMHLIIARFIGGAAGGGCFTVIPIY 130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,566,040
Number of Sequences: 53049
Number of extensions: 347113
Number of successful extensions: 648
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)