Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17n09
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.79 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.79 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.79 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   1.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   1.8  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   5.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.4  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    21   9.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 439 SCTYTLFFYNHSPYFIYSILRSLQNI 362
           S  Y +  +N SP+ IYS L  L  I
Sbjct: 463 SAAYNVELHNSSPFSIYSFLERLNLI 488


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 439 SCTYTLFFYNHSPYFIYSILRSLQNI 362
           S  Y +  +N SP+ IYS L  L  I
Sbjct: 501 SAAYNVELHNSSPFSIYSFLERLNLI 526


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 296 HPDLDPYVKKLIAAKHKVTVVLNVLQASQDRINEIRRMIVKE 421
           H ++ PY++K+IAA          ++    RI E+ R ++ E
Sbjct: 757 HANIGPYIQKMIAA----AAPFKGMETQDYRIPEVMRRLMSE 794



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 188  QLDDRVKATRIAQLELKQQIDSLNEELLKVREALNNHPDL 307
            Q +DR + T  +  +  QQ     ++  + ++ LN++PDL
Sbjct: 1434 QQEDRDRKTLTSAPQQPQQQQQQQQQQQQQQQQLNHYPDL 1473


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 442 NSCTYTLFFYNHSPYFIYSILRSLQNIQD 356
           N   YTL  Y H     Y+++R  +++ D
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKFRDVLD 275


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 442 NSCTYTLFFYNHSPYFIYSILRSLQNIQD 356
           N   YTL  Y H     Y+++R  +++ D
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKFRDVLD 275


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 442 NSCTYTLFFYNHSPY 398
           NSC Y+  +YN++ Y
Sbjct: 309 NSCNYSNNYYNNNNY 323


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 418 FYNHSPYFIYSILRSLQNIQ 359
           +Y H P +  SI+  L NI+
Sbjct: 271 YYPHVPEYSSSIIMELHNIE 290


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 418 FYNHSPYFIYSILRSLQNIQ 359
           +Y H P +  SI+  L NI+
Sbjct: 286 YYPHVPEYSSSIIMELHNIE 305


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 432 VQLLYKLHYNHHLRNQSKV 488
           ++L  + HYNH+L  + ++
Sbjct: 21  LELEKEFHYNHYLTRRRRI 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,345
Number of Sequences: 438
Number of extensions: 2830
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)