Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17m19
(511 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 2.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 2.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 5.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 5.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 5.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.8
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.6 bits (46), Expect = 2.4
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = -2
Query: 345 RRIFHYCTSTELLVRYNIIYNCLLRGLIIQYQITLRTVRELS*KSRFFQTKGVLEYIDNL 166
+++ C ++ ++ +YN LL + Y + R + E +S+F G Y +
Sbjct: 661 KQVILKCNIQDMSFLFSQLYNALLILISTVYAVKTRKIPENFNESKFI---GFTMYTTCI 717
Query: 165 LWWLSVEV 142
+W V +
Sbjct: 718 IWLAFVPI 725
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 2.4
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = -2
Query: 345 RRIFHYCTSTELLVRYNIIYNCLLRGLIIQYQITLRTVRELS*KSRFFQTKGVLEYIDNL 166
+++ C ++ ++ +YN LL + Y + R + E +S+F G Y +
Sbjct: 751 KQVILKCNIQDMSFLFSQLYNALLILISTVYAVKTRKIPENFNESKFI---GFTMYTTCI 807
Query: 165 LWWLSVEV 142
+W V +
Sbjct: 808 IWLAFVPI 815
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -2
Query: 411 DYVYVALFRYQLVKVYIP 358
D ++ F Y L+++YIP
Sbjct: 234 DLLFKREFSYYLIQIYIP 251
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -2
Query: 411 DYVYVALFRYQLVKVYIP 358
D ++ F Y L+++YIP
Sbjct: 234 DLLFKREFSYYLIQIYIP 251
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 364 HPDQDRPSNFPLL 326
H D+++PS +PLL
Sbjct: 61 HDDREQPSVYPLL 73
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 9.8
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 313 FGGGTIVENSTVGLDRDVNFYKLVSEKSDVNIVAG 417
F G + NS VG VNF ++++ V G
Sbjct: 928 FSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEG 962
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,437
Number of Sequences: 438
Number of extensions: 2902
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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