Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17l21
(272 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 38 0.004
BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 38 0.004
AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens ... 38 0.004
AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptid... 38 0.004
AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein. 38 0.004
BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1... 38 0.006
BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1... 38 0.006
BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1... 38 0.006
AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein. 38 0.006
AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate carboxypeptid... 38 0.006
BC106033-1|AAI06034.1| 459|Homo sapiens SMC4 protein protein. 29 3.5
BC070161-1|AAH70161.1| 459|Homo sapiens SMC4 protein protein. 29 3.5
BC065259-1|AAH65259.1| 423|Homo sapiens SMC4 protein protein. 29 3.5
BC001557-1|AAH01557.1| 459|Homo sapiens SMC4 protein protein. 29 3.5
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p... 29 3.5
BC128260-1|AAI28261.1| 657|Homo sapiens VIT protein protein. 27 8.1
BC061519-1|AAH61519.1| 203|Homo sapiens VIT protein protein. 27 8.1
AY358338-1|AAQ88704.1| 678|Homo sapiens VIT protein. 27 8.1
AK056772-1|BAB71279.1| 693|Homo sapiens protein ( Homo sapiens ... 27 8.1
AF063833-1|AAL18263.1| 656|Homo sapiens vitrin protein. 27 8.1
AC007363-1|AAF19243.2| 693|Homo sapiens unknown protein. 27 8.1
>BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVXWMQDKLKEVG 272
L +FKY+D+N+D Y + L + VAI SVS + R + RM+ +K++G
Sbjct: 4 LTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLG 56
>BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVXWMQDKLKEVG 272
L +FKY+D+N+D Y + L + VAI SVS + R + RM+ +K++G
Sbjct: 4 LTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLG 56
>AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ10830 fis, clone NT2RP4001143, weakly similar to
SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE (EC 3.5.1.18). ).
Length = 475
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVXWMQDKLKEVG 272
L +FKY+D+N+D Y + L + VAI SVS + R + RM+ +K++G
Sbjct: 4 LTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLG 56
>AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptidase
protein.
Length = 475
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVXWMQDKLKEVG 272
L +FKY+D+N+D Y + L + VAI SVS + R + RM+ +K++G
Sbjct: 4 LTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLG 56
>AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein.
Length = 391
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVXWMQDKLKEVG 272
L +FKY+D+N+D Y + L + VAI SVS + R + RM+ +K++G
Sbjct: 4 LTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLG 56
>BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCD--VKYRADCIRMVXWMQDKLKEVG 272
L ++F+Y+D ++D + Q LKE VAI S S ++R + RM+ D L+ +G
Sbjct: 36 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLG 90
>BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCD--VKYRADCIRMVXWMQDKLKEVG 272
L ++F+Y+D ++D + Q LKE VAI S S ++R + RM+ D L+ +G
Sbjct: 35 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLG 89
>BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCD--VKYRADCIRMVXWMQDKLKEVG 272
L ++F+Y+D ++D + Q LKE VAI S S ++R + RM+ D L+ +G
Sbjct: 36 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLG 90
>AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCD--VKYRADCIRMVXWMQDKLKEVG 272
L ++F+Y+D ++D + Q LKE VAI S S ++R + RM+ D L+ +G
Sbjct: 35 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLG 89
>AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate
carboxypeptidase-like protein 2 protein.
Length = 508
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCD--VKYRADCIRMVXWMQDKLKEVG 272
L ++F+Y+D ++D + Q LKE VAI S S ++R + RM+ D L+ +G
Sbjct: 36 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLG 90
>BC106033-1|AAI06034.1| 459|Homo sapiens SMC4 protein protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 102 TEKTLPEIFKYVDQNKDSYKQLLKEAVAI 188
TEK L +I K++++NK+ + QL E V +
Sbjct: 372 TEKKLNKITKFIEENKEKFTQLDLEDVQV 400
>BC070161-1|AAH70161.1| 459|Homo sapiens SMC4 protein protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 102 TEKTLPEIFKYVDQNKDSYKQLLKEAVAI 188
TEK L +I K++++NK+ + QL E V +
Sbjct: 372 TEKKLNKITKFIEENKEKFTQLDLEDVQV 400
>BC065259-1|AAH65259.1| 423|Homo sapiens SMC4 protein protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 102 TEKTLPEIFKYVDQNKDSYKQLLKEAVAI 188
TEK L +I K++++NK+ + QL E V +
Sbjct: 372 TEKKLNKITKFIEENKEKFTQLDLEDVQV 400
>BC001557-1|AAH01557.1| 459|Homo sapiens SMC4 protein protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 102 TEKTLPEIFKYVDQNKDSYKQLLKEAVAI 188
TEK L +I K++++NK+ + QL E V +
Sbjct: 372 TEKKLNKITKFIEENKEKFTQLDLEDVQV 400
>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
polypeptide-C protein.
Length = 1288
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 102 TEKTLPEIFKYVDQNKDSYKQLLKEAVAI 188
TEK L +I K++++NK+ + QL E V +
Sbjct: 372 TEKKLNKITKFIEENKEKFTQLDLEDVQV 400
>BC128260-1|AAI28261.1| 657|Homo sapiens VIT protein protein.
Length = 657
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 135 VDQNKDSYKQLLKEAVAIPSVSCDVK 212
V NK++ K++ + +P ++CDVK
Sbjct: 24 VHSNKETAKKIKRPKFTVPQINCDVK 49
>BC061519-1|AAH61519.1| 203|Homo sapiens VIT protein protein.
Length = 203
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 135 VDQNKDSYKQLLKEAVAIPSVSCDVK 212
V NK++ K++ + +P ++CDVK
Sbjct: 24 VHSNKETAKKIKRPKFTVPQINCDVK 49
>AY358338-1|AAQ88704.1| 678|Homo sapiens VIT protein.
Length = 678
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 135 VDQNKDSYKQLLKEAVAIPSVSCDVK 212
V NK++ K++ + +P ++CDVK
Sbjct: 24 VHSNKETAKKIKRPKFTVPQINCDVK 49
>AK056772-1|BAB71279.1| 693|Homo sapiens protein ( Homo sapiens
cDNA FLJ32210 fis, clone PLACE6003383, weakly similar to
COCHLIN PRECURSOR. ).
Length = 693
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 135 VDQNKDSYKQLLKEAVAIPSVSCDVK 212
V NK++ K++ + +P ++CDVK
Sbjct: 24 VHSNKETAKKIKRPKFTVPQINCDVK 49
>AF063833-1|AAL18263.1| 656|Homo sapiens vitrin protein.
Length = 656
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 135 VDQNKDSYKQLLKEAVAIPSVSCDVK 212
V NK++ K++ + +P ++CDVK
Sbjct: 24 VHSNKETAKKIKRPKFTVPQINCDVK 49
>AC007363-1|AAF19243.2| 693|Homo sapiens unknown protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 135 VDQNKDSYKQLLKEAVAIPSVSCDVK 212
V NK++ K++ + +P ++CDVK
Sbjct: 24 VHSNKETAKKIKRPKFTVPQINCDVK 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,927,858
Number of Sequences: 237096
Number of extensions: 572921
Number of successful extensions: 1312
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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