Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt17l20
(392 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 128 2e-32
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 56 1e-10
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 56 1e-10
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 1.7
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 2.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 2.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 2.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.7
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 20 8.8
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 20 8.8
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 128 bits (309), Expect = 2e-32
Identities = 58/95 (61%), Positives = 75/95 (78%)
Frame = +3
Query: 81 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 260
+F+GK+YK+ SSENFD+FMK +GVG++TRK ++V+P VEL ++ Y L T+S FK TE
Sbjct: 3 DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62
Query: 261 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 365
+KFK GEEFEE+ DG KVKSVCT +GN L QVQK
Sbjct: 63 IKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQK 97
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 56.4 bits (130), Expect = 1e-10
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 78 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 257
++F GK ++ S NF+EF K +G + P+ EL K+GDE+ +SS T
Sbjct: 2 VQFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTY 59
Query: 258 EMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVT 389
FK FEE K ++V + EGNT K + D L+VT
Sbjct: 60 TKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 105
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 56.0 bits (129), Expect = 1e-10
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 81 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 260
+F GK ++ S NF+EF K +G + P+ EL K+GDE+ +SS T
Sbjct: 1 QFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYT 58
Query: 261 MKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVT 389
FK FEE K ++V + EGNT K + D L+VT
Sbjct: 59 KTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 1.7
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 265 FISVVLKVEEVTKLYSSPSLRSSTV 191
FIS+++ +E+ + +SP L + T+
Sbjct: 9 FISLIILNDEIYNIIASPQLNNPTL 33
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 327 CTFEGNTLKQVQKAPDGL 380
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 327 CTFEGNTLKQVQKAPDGL 380
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 327 CTFEGNTLKQVQKAPDGL 380
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 135 MKTIGVGLITRKAANAVTPTVELRKDGDEYN 227
MKTI G + V E K G EY+
Sbjct: 513 MKTIKKGSFVTQYVGEVITNEEAEKRGKEYD 543
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 20.2 bits (40), Expect = 8.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 134 HEDHRRGSDHPQSRQRG 184
HE++ HP R RG
Sbjct: 381 HEENESVDKHPNRRARG 397
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 20.2 bits (40), Expect = 8.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 261 MKFKPGEEFEEDRADGA 311
+KF P FEED +G+
Sbjct: 314 IKFVPSYPFEEDINEGS 330
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,031
Number of Sequences: 438
Number of extensions: 1975
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9638226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -