Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt17l06
         (524 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053892-1|AAH53892.1|  871|Homo sapiens ZNF618 protein protein.       29   10.0 
AL590077-1|CAI40418.1| 1113|Homo sapiens ATPase, Class VI, type ...    29   10.0 
AL356785-3|CAI41446.1| 1113|Homo sapiens ATPase, Class VI, type ...    29   10.0 
AL161777-4|CAI39716.1| 1113|Homo sapiens ATPase, Class VI, type ...    29   10.0 

>BC053892-1|AAH53892.1|  871|Homo sapiens ZNF618 protein protein.
          Length = 871

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 38  SQDVLKKYKKKNYYIPHFRSFPCPFCGFFLIYLSIQTDISILYLPIPILFNYRIVA-VRR 214
           + D+ KK + +        ++ C FCG    Y +   +   L+ PI   F+ R+    + 
Sbjct: 234 TSDIFKKKEVRQCQKRETGNYTCEFCGKQYKYYTPYQEHVALHAPIKSAFSRRVEGKAQN 293

Query: 215 GFEEINRS 238
            FEE N S
Sbjct: 294 HFEETNSS 301


>AL590077-1|CAI40418.1| 1113|Homo sapiens ATPase, Class VI, type 11C
           protein.
          Length = 1113

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +2

Query: 35  NSQDVLKKYKKKNYYIPHFRSFPCPFCGFFLIYLSIQTDISILYLPIPILFNYRIVAVRR 214
           +S+  L  +  KN +    R     F   FL+ +++ T  S +   +P+ F   + A+++
Sbjct: 47  SSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVTVDTPTSPVTSGLPLFFVITVTAIKQ 106

Query: 215 GFEEINR 235
           G+E+  R
Sbjct: 107 GYEDCLR 113


>AL356785-3|CAI41446.1| 1113|Homo sapiens ATPase, Class VI, type 11C
           protein.
          Length = 1113

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +2

Query: 35  NSQDVLKKYKKKNYYIPHFRSFPCPFCGFFLIYLSIQTDISILYLPIPILFNYRIVAVRR 214
           +S+  L  +  KN +    R     F   FL+ +++ T  S +   +P+ F   + A+++
Sbjct: 47  SSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVTVDTPTSPVTSGLPLFFVITVTAIKQ 106

Query: 215 GFEEINR 235
           G+E+  R
Sbjct: 107 GYEDCLR 113


>AL161777-4|CAI39716.1| 1113|Homo sapiens ATPase, Class VI, type 11C
           protein.
          Length = 1113

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +2

Query: 35  NSQDVLKKYKKKNYYIPHFRSFPCPFCGFFLIYLSIQTDISILYLPIPILFNYRIVAVRR 214
           +S+  L  +  KN +    R     F   FL+ +++ T  S +   +P+ F   + A+++
Sbjct: 47  SSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVTVDTPTSPVTSGLPLFFVITVTAIKQ 106

Query: 215 GFEEINR 235
           G+E+  R
Sbjct: 107 GYEDCLR 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,809,424
Number of Sequences: 237096
Number of extensions: 1190114
Number of successful extensions: 1990
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1990
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)